YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30253763, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	94 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30253763, gi|....

Description	E-value	Query Range	Subject Range
gi\|68189669, gi\|... - gi\|69280014\|ref\|ZP_00614729.1\| Chaperonin Cpn10 [Mesorhizobium sp. BNC1], gi\|68189669\|gb\|EAN04333.1\|...	2.0E-35	[2..94]	[6..98]
gi\|114328845, gi... - gi\|114328845\|ref\|YP_746002.1\| co-chaperonin GroES [Granulibacter bethesdensis CGDNIH1], gi\|114317019...	2.0E-35	[2..94]	[9..101]
gi\|78044510, gi\|... - gi\|78044510\|ref\|YP_359660.1\| chaperonin, 10 kDa [Carboxydothermus hydrogenoformans Z-2901], gi\|77996...	4.0E-35	[1..93]	[1..93]
gi\|114705803, gi... - gi\|114705803\|ref\|ZP_01438706.1\| co-chaperonin GroES [Fulvimarina pelagi HTCC2506], gi\|114538649\|gb\|E...	4.0E-35	[2..94]	[6..98]
gi\|78695632, gi\|... - gi\|78695632\|ref\|ZP_00860143.1\| heat shock protein [Bradyrhizobium sp. BTAi1], gi\|78516195\|gb\|EAP2949...	4.0E-35	[2..93]	[5..96]
gi\|27353501, gi\|... - gi\|27380337\|ref\|NP_771866.1\| co-chaperonin GroES [Bradyrhizobium japonicum USDA 110], gi\|27353501\|db...	6.0E-35	[2..93]	[5..96]
gi\|227818821, gi... - gi\|36959079\|gb\|AAQ87504.1\| 10 kDa chaperonin GroES [Rhizobium sp. NGR234], gi\|227818821\|ref\|YP_00282...	8.0E-35	[2..93]	[3..94]
gi\|183179296 - gi\|183179296\|gb\|ACC44139.1\| GroES [Bartonella clarridgeiae] gi\|49203112, gi\|... - gi\|49476035\|ref\|YP_034076.1\| co-chaperonin GroES [Bartonella henselae str. Houston-1], gi\|49238843\|e...	1.0E-34	[2..94]	[6..98]
gi\|113879392, gi... - gi\|150396500\|ref\|YP_001326967.1\| chaperonin Cpn10 [Sinorhizobium medicae WSM419], gi\|150028015\|gb\|AB...	2.0E-34	[2..93]	[3..94]
gi\|484348, gi\|152237 - pir\|\|JN0513 heat shock protein groES (clone Rhz C) - Rhizobium meliloti, gi\|152237\|gb\|AAA26286.1\| g...	2.0E-34	[2..93]	[3..94]

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Predicted Domain #1

Region A:
Residues: [1-94]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKPLGDRVV IELVQAEEKT ASGIVLPDTA KEKPQEGKVI AVGTGRVLEN GERVALEVAA  60
   61 GDLIIFSKYA GTEVKYEGTD YLILRESDIL AVIG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	32.154902
Match:	1wnrA
Description:	Crystal structure of the Cpn10 from Thermus thermophilus HB8
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
chaperone binding	3.52404463833595	bayes_pls_golite062009
unfolded protein binding	2.30823619318536	bayes_pls_golite062009
binding	2.14732485977044	bayes_pls_golite062009
protein binding	1.37872958560856	bayes_pls_golite062009
catalytic activity	0.217171374336363	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: