YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|2983181, gi\|1...
Organism:	Aquifex aeolicus VF5
Length:	197 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2983181, gi|1....

Description	E-value	Query Range	Subject Range
gi\|111612806, gi... - gi\|111612806\|ref\|ZP_01399890.1\| glutamine amidotransferase of anthranilate synthase [Verminephrobact...	225.0	[0..1]	[187..59]
gi\|83311960, gi\|... - gi\|83311960\|ref\|YP_422224.1\| anthranilate/para-aminobenzoate synthase component II [Magnetospirillum...	219.0	[0..4]	[192..3]
gi\|46201429 - gi\|46201429\|ref\|ZP_00055031.2\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Magn...	218.0	[0..4]	[187..3]
gi\|110647998, gi... - gi\|110834887\|ref\|YP_693746.1\| anthranilate synthase, component II [Alcanivorax borkumensis SK2], gi\|...	218.0	[0..1]	[188..1]
gi\|56477813, gi\|... - gi\|56477813\|ref\|YP_159402.1\| anthranilate synthase (component II) [Aromatoleum aromaticum EbN1], gi\|...	218.0	[0..4]	[187..3]
gi\|110336432, gi... - gi\|121592801\|ref\|YP_984697.1\| anthranilate synthase component II [Acidovorax sp. JS42], gi\|120604881...	217.0	[0..2]	[187..3]
gi\|255662132, gi... - gi\|83720076\|ref\|YP_443417.1\| anthranilate synthase component II [Burkholderia thailandensis E264], g... gi\|167582462 - gi\|167582462\|ref\|ZP_02375336.1\| anthranilate synthase component II [Burkholderia thailandensis TXDOH...	217.0	[0..4]	[191..3]
gi\|67778712, gi\|... - gi\|91790288\|ref\|YP_551240.1\| anthranilate synthase component II [Polaromonas sp. JS666], gi\|91699513...	217.0	[0..1]	[187..1]
gi\|111617994, gi... - gi\|120609283\|ref\|YP_968961.1\| anthranilate synthase component II [Acidovorax avenae subsp. citrulli ...	217.0	[0..1]	[188..1]
gi\|77965841, gi\|... - gi\|78065096\|ref\|YP_367865.1\| anthranilate synthase component II [Burkholderia sp. 383], gi\|77965841\|...	216.0	[0..4]	[187..3]

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Predicted Domain #1

Region A:
Residues: [1-197]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLMIDNYD SFTYNLVQYL GSLGADVIVR RNDQIRLEEV REINPDAIVI SPGPCTPKEA  60
   61 GISVPLIKTY YKEYPILGVC LGHQSIGYAF GAKIVRAKRL MHGKTSQIFH TGEGVFKNLP 120
  121 SPFTAVRYHS LVIDKNTLPE ELKITAWSDD EEIMGIEHKE YPVYGVQFHP ESVLSEHGME 180
  181 ILKNFLELAE ERKLVKK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	40.522879
Match:	1qdlB
Description:	Anthranilate synthase GAT subunit, TrpG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
4-amino-4-deoxychorismate synthase activity	4.48164623771604	bayes_pls_golite062009
anthranilate synthase activity	2.51214170411838	bayes_pls_golite062009
ligase activity	1.77692713123297	bayes_pls_golite062009
oxo-acid-lyase activity	1.35896725827905	bayes_pls_golite062009
catalytic activity	1.30391542469987	bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds	0.628648036096965	bayes_pls_golite062009
imidazoleglycerol-phosphate synthase activity	0.270391651600004	bayes_pls_golite062009
carbon-carbon lyase activity	0.0769356405014503	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: