Protein: | gi|30255253, gi|... |
Organism: | Bacillus anthracis str. Ames |
Length: | 371 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30255253, gi|....
Description | E-value | Query Range |
Subject Range |
|
5.0E-84 | [1..371] | [1..371] |
|
9.0E-84 | [1..371] | [4..374] |
|
1.0E-82 | [1..371] | [1..371] |
|
1.0E-82 | [1..371] | [1..371] |
|
1.0E-82 | [1..371] | [1..371] |
|
4.0E-82 | [1..371] | [1..371] |
|
7.0E-82 | [1..371] | [4..374] |
|
1.0E-79 | [1..371] | [1..371] |
|
3.0E-77 | [6..364] | [6..366] |
|
2.0E-72 | [1..359] | [3..376] |
Region A: Residues: [1-136] |
1 11 21 31 41 51 | | | | | | 1 MLFPDLANKI VREVRRLIKE NIIIINIQGV IIASTDIERI GQFHEGALRC AKQKKTVIIT 60 61 KEDERRLHGV KAGMNLPLLF HDEVIGVIGI TGEPENISQY GEILRKMTEL LIHENYFLEQ 120 121 LELEHRSYEA FVFDWL |
Detection Method: | |
Confidence: | 1.13 |
Match: | 2gx5A |
Description: | No description for 2gx5A was found. |
Region A: Residues: [137-278] |
1 11 21 31 41 51 | | | | | | 1 QNTDWSPSFL DRAKTLGIDL YKKKQLILFS IDQNDTMLQR KIWQHVRNLL TKEHLFVRWG 60 61 NDRFILFTAM SSKEQTYQFL KRLKQDCETL FSIPLYIGIG QSVTPSNMNL SYEQALQALS 120 121 VSLATKKIVF NDDLRLEMCL QD |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.719 | N/A | N/A | d.110.4 | SNARE-like |
View | Download | 0.656 | N/A | N/A | c.23.5 | Flavoproteins |
View | Download | 0.606 | N/A | N/A | d.146.1 | Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain |
View | Download | 0.603 | N/A | N/A | f.7.1 | Lipovitellin-phosvitin complex; beta-sheet shell regions |
View | Download | 0.560 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
Region A: Residues: [279-371] |
1 11 21 31 41 51 | | | | | | 1 ISAETREQFL KRTIKNLLSS PELMHTLRLF IDYNQSYKQT AEQLHIHINT LHYRLKKIEE 60 61 YTGLDPKQFK DLNILYFSLL LLDNHTKKND KID |
Detection Method: | |
Confidence: | 1.22 |
Match: | 1ntcA |
Description: | DNA-binding domain of NTRC |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
transcription regulator activity | 3.3433274000438 | bayes_pls_golite062009 |
DNA binding | 2.69924718143396 | bayes_pls_golite062009 |
binding | 2.59564404935518 | bayes_pls_golite062009 |
nucleic acid binding | 2.49248256652331 | bayes_pls_golite062009 |
transcription factor activity | 2.13079795809497 | bayes_pls_golite062009 |
sequence-specific DNA binding | 0.694747504121538 | bayes_pls_golite062009 |
RNA polymerase II transcription factor activity | 0.611882179195983 | bayes_pls_golite062009 |
protein binding | 0.440093783038461 | bayes_pls_golite062009 |
transcription repressor activity | 0.382260654915774 | bayes_pls_golite062009 |
transcription activator activity | 0.249743327112707 | bayes_pls_golite062009 |