YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30265232, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	441 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30265232, gi|....

Description	E-value	Query Range	Subject Range
gi\|229094302, gi... - gi\|229094302\|ref\|ZP_04225377.1\| Glycoside hydrolase, family 4 [Bacillus cereus Rock3-42], gi\|2286890... gi\|228936494, gi... - gi\|228936494\|ref\|ZP_04099292.1\| Glycoside hydrolase, family 4 [Bacillus thuringiensis serovar andalo... gi\|222098662, gi... - gi\|222098662\|ref\|YP_002532720.1\| 6-phospho-beta-glucosidase [Bacillus cereus Q1], gi\|221242721\|gb\|AC... gi\|206745000, gi... - gi\|206976865\|ref\|ZP_03237768.1\| 6-phospho-beta-glucosidase [Bacillus cereus H3081.97], gi\|206745000\|... gi\|49481176, gi\|... - gi\|49481176\|ref\|YP_039195.1\| 6-phospho-beta-glucosidase [Bacillus thuringiensis serovar konkukian st... gi\|196039527, gi... - gi\|196039527\|ref\|ZP_03106832.1\| 6-phospho-beta-glucosidase (Cellobiose-6-phosphatehydrolase) (Phosph...	0.0	[1..441]	[1..441]
gi\|229153363, gi... - gi\|229153363\|ref\|ZP_04281541.1\| Glycoside hydrolase, family 4 [Bacillus cereus m1550], gi\|228629967\|... gi\|228635751, gi... - gi\|229147738\|ref\|ZP_04276081.1\| Glycoside hydrolase, family 4 [Bacillus cereus BDRD-ST24], gi\|228635... gi\|228652793, gi... - gi\|229130454\|ref\|ZP_04259410.1\| Glycoside hydrolase, family 4 [Bacillus cereus BDRD-Cer4], gi\|228652... gi\|30023242, gi\|... - gi\|30023242\|ref\|NP_834873.1\| 6-phospho-beta-glucosidase [Bacillus cereus ATCC 14579], gi\|29898802\|gb...	0.0	[1..441]	[1..441]
gi\|52140360, gi\|... - gi\|52140360\|ref\|YP_086471.1\| 6-phospho-beta-glucosidase [Bacillus cereus E33L], gi\|51973829\|gb\|AAU15...	0.0	[1..441]	[1..441]
gi\|89205072, gi\|... - gi\|89205072\|ref\|ZP_01183645.1\| Alpha-galactosidase [Bacillus weihenstephanensis KBAB4], gi\|89157086\|...	0.0	[1..441]	[1..441]
gi\|228988430, gi... - gi\|228988430\|ref\|ZP_04148521.1\| Glycoside hydrolase, family 4 [Bacillus thuringiensis serovar tochig... gi\|47569704, gi\|... - gi\|47570010\|ref\|ZP_00240672.1\| 6-phospho-beta-glucosidase [Bacillus cereus G9241], gi\|47569704\|ref\|Z... gi\|42784363, gi\|... - gi\|42784363\|ref\|NP_981610.1\| 6-phospho-beta-glucosidase [Bacillus cereus ATCC 10987], gi\|42740295\|gb...	0.0	[1..441]	[1..441]
gi\|152977421, gi... - gi\|89201162\|ref\|ZP_01179908.1\| Alpha-galactosidase [Bacillus cereus subsp. cytotoxis NVH 391-98], gi...	0.0	[1..441]	[1..441]
gi\|52005584, gi\|... - gi\|52787763\|ref\|YP_093592.1\| LicH [Bacillus licheniformis ATCC 14580], gi\|52350265\|gb\|AAU42899.1\| Li...	0.0	[1..440]	[1..441]
gi\|221325345 - gi\|221325345\|ref\|ZP_03606639.1\| 6-phospho-beta-glucosidase [Bacillus subtilis subsp. subtilis str. S... LICH_BACSU - Probable 6-phospho-beta-glucosidase OS=Bacillus subtilis GN=licH PE=2 SV=1 gi\|221321060 - gi\|221321060\|ref\|ZP_03602354.1\| 6-phospho-beta-glucosidase [Bacillus subtilis subsp. subtilis str. J... LICH_BACSU - Probable 6-phospho-beta-glucosidase OS=Bacillus subtilis (strain 168) GN=licH PE=2 SV=1 gi\|221316149 - gi\|221316149\|ref\|ZP_03597954.1\| 6-phospho-beta-glucosidase [Bacillus subtilis subsp. subtilis str. N...	0.0	[2..440]	[3..441]
gi\|56421747, gi\|... - gi\|56421747\|ref\|YP_149065.1\| 6-phospho-beta-glucosidase [Geobacillus kaustophilus HTA426], gi\|563815...	0.0	[2..437]	[3..439]
gi\|22776491, gi\|... - gi\|23098266\|ref\|NP_691732.1\| 6-phospho-beta-glucosidase [Oceanobacillus iheyensis HTE831], gi\|227764...	0.0	[1..440]	[1..440]

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Predicted Domain #1

Region A:
Residues: [1-441]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGIKIATIG GGSSYTPELI EGFIKRYDEL PVREIWLVDI EAGKEKLEIV GNLAKRMVKK  60
   61 SGLPIEVHLT LDRREALKDA DFVTTQLRVG LLEARAKDEA IPLKYDVIGQ ETNGPGGLFK 120
  121 ALRTIPVILD ICKDMEELCP NAWLINFANP AGMVTEAVLR YTNIQRVVGL CNVPIGIRMG 180
  181 LARLLEVDAS RVHVDFAGLN HMVYGLDVYL DGVSVMDRVL ELVTDPEKQI TMENIAALNW 240
  241 EPDFIRGLRA IPCPYHRYYY KTREMLEEEK EASVEKGTRA EVVKQLEDDL FELYKDPNLD 300
  301 IKPPQLEKRG GAYYSDAACS LITSIYNNKG DIQPVNTRNN GTIASLPHDS AVEVNCIITK 360
  361 EGPKPIAVGD LPVPVRGLVQ QIKSFERTTI EAAVTGDYHK ALLAMTINPL VPSDKVAKQI 420
  421 LDEMLEAHKE YLPQFFKKVE K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	117.0
Match:	1s6yA
Description:	2.3A crystal structure of phospho-beta-glucosidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.04073391751087	bayes_pls_golite062009
lactate dehydrogenase activity	0.87934022340198	bayes_pls_golite062009
oxidoreductase activity	0.801369736578234	bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors	0.800162074505462	bayes_pls_golite062009
L-lactate dehydrogenase activity	0.62197650488981	bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	0.207367749250588	bayes_pls_golite062009
malate dehydrogenase activity	0.0457268286491508	bayes_pls_golite062009
L-malate dehydrogenase activity	0.0199505659839099	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: