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View Structure Prediction Details

Protein: gi|30259790, gi|...
Organism: Bacillus anthracis str. Ames
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259790, gi|....

Description E-value Query
Range		 Subject
Range
SYY_BACCA - Tyrosine--tRNA ligase OS=Bacillus caldotenax GN=tyrS PE=3 SV=1
 0.0 [1..417] [1..417]
SYY_GEOKA - Tyrosine--tRNA ligase OS=Geobacillus kaustophilus (strain HTA426) GN=tyrS PE=3 SV=1
SYY_GEOKA - Tyrosyl-tRNA synthetase OS=Geobacillus kaustophilus GN=tyrS PE=3 SV=1
 0.0 [1..417] [1..417]
SYY2_BACC1 - Tyrosine--tRNA ligase 2 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=tyrS2 PE=3 SV=1
 0.0 [1..419] [1..419]
SYY_GEOSE - Tyrosine--tRNA ligase OS=Geobacillus stearothermophilus GN=tyrS PE=1 SV=1
 0.0 [1..417] [1..417]
SYY2_BACHK - Tyrosyl-tRNA synthetase 2 OS=Bacillus thuringiensis subsp. konkukian GN=tyrS2 PE=3 SV=1
SYY2_BACHK - Tyrosine--tRNA ligase 2 OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=tyrS2 PE=3 SV=1
 0.0 [1..419] [1..419]
SYY2_BACCZ - Tyrosine--tRNA ligase 2 OS=Bacillus cereus (strain ZK / E33L) GN=tyrS2 PE=3 SV=1
 0.0 [1..419] [1..419]
gi|163942790, gi... - gi|89204972|ref|ZP_01183545.1| Tyrosyl-tRNA synthetase, class Ib [Bacillus weihenstephanensis KBAB4]...
 0.0 [1..419] [1..419]
SYY2_BACCR - Tyrosine--tRNA ligase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCI...
gi|228653257, gi... - gi|229130324|ref|ZP_04259283.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-Cer4], gi|228653257|gb...
 0.0 [1..419] [1..419]
gi|74491958, gi|... - gi|75760562|ref|ZP_00740596.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis A...
 0.0 [1..419] [1..419]
gi|89100096, gi|... - gi|89100096|ref|ZP_01172965.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911], gi|89085186|gb|E...
 0.0 [1..417] [1..417]

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Predicted Domain #1
Region A:
Residues: [1-419] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIIDELEWR GAVNQQTDEE GLRKLVEEKK ISLYCGVDPT GDSMHIGHLI PFMMMKRFQL  60
   61 AGHHPVILIG GATGTIGDPS GRQSERQLQT LEVVQHNVDA LTAQMKKLFD FGGNSEVKMV 120
  121 NNYDWTHEIN IIEFLRDYGK NFSINSMLAK DIVASRLDTG ISFTEFTYQI LQAMDFHHLY 180
  181 TKEDVQLQIG GSDQWGNITS GLDLIRKLEG HEAKVFGLTI PLLLKSDGTK FGKSAGGAVW 240
  241 LDPEKTTPFE FYQFWVNTDD RDVVKYLKYF TFLTKERIDE LAVKVETEPH KREAQKVLAE 300
  301 EMTKFVHGEE ALLQAVKITA ALFSGDIKSL TADEIEQGFK EMPTFQSSKE TKNIVEWLVD 360
  361 LGIEPSRRQA REDINNGAIS MNGEKVTDVG TDVTVENSFD GRFIIIRKGK KNYSLVKLG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 123.0
Match: 2ts1A
Description: STRUCTURE OF TYROSYL-T/RNA SYNTHETASE REFINED AT 2.3 ANGSTROMS RESOLUTION. INTERACTION OF THE ENZYME WITH THE TYROSYL ADENYLATE INTERMEDIATE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ligase activity, forming carbon-oxygen bonds 7.16276509815667 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 7.16276509815667 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 7.13957775963187 bayes_pls_golite062009
tyrosine-tRNA ligase activity 6.18775771640881 bayes_pls_golite062009
ligase activity 6.11211476973434 bayes_pls_golite062009
glutamate-tRNA ligase activity 2.63681738794687 bayes_pls_golite062009
methionine-tRNA ligase activity 2.56893064485672 bayes_pls_golite062009
catalytic activity 2.37674226834122 bayes_pls_golite062009
arginine-tRNA ligase activity 1.50161401062914 bayes_pls_golite062009
tryptophan-tRNA ligase activity 1.14187887833901 bayes_pls_golite062009
cysteine-tRNA ligase activity 0.844943947059557 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.625793556381714 bayes_pls_golite062009
binding 0.485102284225571 bayes_pls_golite062009
nucleic acid binding 0.449504767632354 bayes_pls_golite062009
nucleotidyltransferase activity 0.2293846471193 bayes_pls_golite062009
glutamine-tRNA ligase activity 0.118292082006187 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle