YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264340, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	218 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264340, gi|....

Description	E-value	Query Range	Subject Range
gi\|83574855, gi\|... - gi\|83591941\|ref\|YP_425693.1\| phosphate uptake regulator, PhoU [Rhodospirillum rubrum ATCC 11170], gi... gi\|48763369 - ref\|ZP_00267924.1\| COG0704: Phosphate uptake regulator [Rhodospirillum rubrum]	5.0E-51	[4..212]	[8..216]
gi\|78043312, gi\|... - gi\|78043312\|ref\|YP_360864.1\| phosphate transport system regulatory protein PhoU [Carboxydothermus hy...	2.0E-49	[3..217]	[4..218]
gi\|114805161, gi... - gi\|167039230\|ref\|YP_001662215.1\| phosphate uptake regulator, PhoU [Thermoanaerobacter sp. X514], gi\|... gi\|242257478, gi... - gi\|242257478\|ref\|ZP_04802341.1\| phosphate uptake regulator, PhoU [Thermoanaerobacter sp. X513], gi\|2...	5.0E-49	[1..217]	[1..217]
gi\|114315752, gi... - gi\|114327578\|ref\|YP_744735.1\| phosphate transport system protein phoU [Granulibacter bethesdensis CG...	1.0E-48	[2..211]	[10..219]
gi\|77977952, gi\|... - gi\|77977952\|ref\|ZP_00833389.1\| COG0704: Phosphate uptake regulator [Yersinia intermedia ATCC 29909],...	5.0E-48	[2..214]	[10..222]
gi\|15640746, gi\|... - gi\|9655171\|gb\|AAF93892.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae O1 bio... gi\|11277946 - pir\|\|A82287 phosphate transport system regulatory protein PhoU VC0727 [imported] - Vibrio cholerae (... gi\|150421384, gi... - gi\|75823462\|ref\|ZP_00752961.1\| COG0704: Phosphate uptake regulator [Vibrio cholerae RC385], gi\|25422... gi\|75829055, gi\|... - gi\|75829055\|ref\|ZP_00758375.1\| COG0704: Phosphate uptake regulator [Vibrio cholerae MO10], gi\|254847... gi\|147674474, gi... - gi\|75826082\|ref\|ZP_00755517.1\| COG0704: Phosphate uptake regulator [Vibrio cholerae O395], gi\|227117... gi\|121547259, gi... - gi\|121590894\|ref\|ZP_01678217.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|125622387, gi... - gi\|75819478\|ref\|ZP_00749556.1\| COG0704: Phosphate uptake regulator [Vibrio cholerae V51], gi\|2542250... gi\|124114449, gi... - gi\|153216134\|ref\|ZP_01950289.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|121629122, gi... - gi\|75815202\|ref\|ZP_00745723.1\| COG0704: Phosphate uptake regulator [Vibrio cholerae V52], gi\|1217286... gi\|153220740, gi... - gi\|153220740\|ref\|ZP_01951851.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|197752887, gi... - gi\|254285450\|ref\|ZP_04960414.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|153802819, gi... - gi\|153802819\|ref\|ZP_01957405.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|153818837, gi... - gi\|153818837\|ref\|ZP_01971504.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|229510671, gi... - gi\|229510671\|ref\|ZP_04400150.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|227008794, gi... - gi\|227080906\|ref\|YP_002809457.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae... gi\|229357880, gi... - gi\|229505657\|ref\|ZP_04395167.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|229513132, gi... - gi\|229513132\|ref\|ZP_04402598.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|229517793, gi... - gi\|229517793\|ref\|ZP_04407237.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|229338956, gi... - gi\|229525375\|ref\|ZP_04414780.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|229530140, gi... - gi\|229530140\|ref\|ZP_04419530.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|153829410, gi... - gi\|153829410\|ref\|ZP_01982077.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ... gi\|229371330, gi... - gi\|229608675\|ref\|YP_002879323.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae... gi\|149738984, gi... - gi\|153827118\|ref\|ZP_01979785.1\| phosphate transport system regulatory protein PhoU [Vibrio cholerae ...	9.0E-48	[2..214]	[7..219]
gi\|166205645, gi... - gi\|166213347\|ref\|ZP_02239382.1\| phosphate transport system regulatory protein PhoU [Yersinia pestis ... gi\|167401532, gi... - gi\|167401532\|ref\|ZP_02307026.1\| phosphate transport system regulatory protein PhoU [Yersinia pestis ... gi\|167425542, gi... - gi\|167425542\|ref\|ZP_02317295.1\| phosphate transport system regulatory protein PhoU [Yersinia pestis ... gi\|145601160, gi... - gi\|145601160\|ref\|YP_001165236.1\| transcriptional regulator PhoU [Yersinia pestis Pestoides F], gi\|14... gi\|186897478, gi... - gi\|186897478\|ref\|YP_001874590.1\| transcriptional regulator PhoU [Yersinia pseudotuberculosis PB1/+],... gi\|108782061, gi... - gi\|108810148\|ref\|YP_654064.1\| transcriptional regulator PhoU [Yersinia pestis Antiqua], gi\|108782061... Q663R6\|Q663R6_YERPS - Phosphate transport regulatory protein - Yersinia pseudotuberculosis gi\|51591525, gi\|... - gi\|51598243\|ref\|YP_072434.1\| transcriptional regulator PhoU [Yersinia pseudotuberculosis IP 32953], ... gi\|108814130, gi... - gi\|229904671\|ref\|ZP_04519782.1\| negative regulator of PhoR/PhoB two-component regulator [Yersinia pe... gi\|45443743, gi\|... - gi\|45443743\|ref\|NP_995282.1\| transcriptional regulator PhoU [Yersinia pestis biovar Microtus str. 91... gi\|22127995, gi\|... - gi\|22127995\|ref\|NP_671418.1\| transcriptional regulator PhoU [Yersinia pestis KIM], gi\|21961142\|gb\|AA... gi\|162419718, gi... - gi\|77634101\|ref\|ZP_00796209.1\| COG0704: Phosphate uptake regulator [Yersinia pestis Angola], gi\|1624... gi\|152962140, gi... - gi\|77630946\|ref\|ZP_00793532.1\| COG0704: Phosphate uptake regulator [Yersinia pseudotuberculosis IP 3... gi\|229700221, gi... - gi\|229896783\|ref\|ZP_04511946.1\| negative regulator of PhoR/PhoB two-component regulator [Yersinia pe...	1.0E-47	[2..214]	[10..222]
gi\|90414597, gi\|... - gi\|90414597\|ref\|ZP_01222570.1\| Putative phosphate transport system regulatory protein PhoU [Photobac... gi\|46912352, gi\|... - gi\|54307926\|ref\|YP_128946.1\| transcriptional regulator PhoU [Photobacterium profundum SS9], gi\|46912...	1.0E-47	[2..214]	[11..223]
gi\|78195156, gi\|... - gi\|78223901\|ref\|YP_385648.1\| phosphate uptake regulator, PhoU [Geobacter metallireducens GS-15], gi\|...	1.0E-47	[3..214]	[7..218]
gi\|77961808, gi\|... - gi\|77961808\|ref\|ZP_00825638.1\| COG0704: Phosphate uptake regulator [Yersinia mollaretii ATCC 43969],...	1.0E-47	[2..214]	[10..222]

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Predicted Domain #1

Region A:
Residues: [1-218]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVREQFQCDL KTLQQKVIEL GELAREALLL AMEGLHKRDV EKALEVIDGD YRMDNLEEEI  60
   61 NDLALMLITK QQPVASDLRR IFISIKTATD LERIADHAVN IAKSTIRLGE KEVSVSLHNL 120
  121 DEMFAIANNM LQLALDAYEQ ENLTFAKQIA EMNDSVDEIY GKAIREFISS VPEQPEAITQ 180
  181 ITQLSFVARY IERVADHITN IAENVFYLVK GKHYLLNE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	42.0
Match:	1xwmA
Description:	The crystal structure of PhoU (phosphate uptake regulator), Structural genomics
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	0.32482412799983	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: