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View Structure Prediction Details

Protein: gi|30258230, gi|...
Organism: Bacillus anthracis str. Ames
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258230, gi|....

Description E-value Query
Range
Subject
Range
gi|114554175, gi... - gi|114554175|ref|XP_001149966.1| PREDICTED: agmatine ureohydrolase (agmatinase) isoform 2 [Pan trogl...
3.0E-93 [2..317] [38..349]
gi|18031951 - gi|18031951|gb|AAL24446.1| agmatinase [Homo sapiens]
3.0E-93 [2..317] [38..349]
gi|78063634, gi|... - gi|78063634|ref|YP_373542.1| agmatinase [Burkholderia sp. 383], gi|77971519|gb|ABB12898.1| agmatinas...
7.0E-93 [1..320] [1..316]
gi|57920942, gi|... - gi|57920942|gb|AAH89134.1| MGC85123 protein [Xenopus laevis], gi|147900416|ref|NP_001089210.1| hypot...
9.0E-92 [4..318] [77..387]
gi|124876352, gi... - gi|84352837|ref|ZP_00977783.1| COG0010: Arginase/agmatinase/formimionoglutamate hydrolase, arginase ...
6.0E-91 [2..320] [3..317]
gi|67666660, gi|... - gi|67666660|ref|ZP_00463903.1| Putative agmatinase [Burkholderia cenocepacia HI2424], gi|67099755|gb...
gi|67655553, gi|... - gi|67655553|ref|ZP_00452939.1| Putative agmatinase [Burkholderia cenocepacia AU 1054], gi|67096832|g...
6.0E-91 [2..320] [39..353]

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Predicted Domain #1
Region A:
Residues: [1-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHGHYLKKN AKFIDREVTK WSEMIKDWEE GVEIFGAALI GAPLSKPSIS HSGASFAPKT  60
   61 IRSMLDAYST YAITEEHDMK ESVLYDCGDI TMHVTDIKES HNRIAKTVGH VTKVNPNMIP 120
  121 IVLGGDHSIS FPSITGFANS KGKVGIIQFD AHHDLRNLDD GGPSNGTPFR SLLENGVITG 180
  181 KQLVQIGIRN FSNARAYHEY AKEHGVTVYT MKDVREREIK DIMTESIEVL RRQGVTSIYI 240
  241 SLDMDVLDQA FAPGCPAIGP GGMDSTTLLD AIEFLGKEPL VQGMDIVEID PTLDFRDMTS 300
  301 RVAAQVIMSF LLARETVSKQ VSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.0
Match: 1gq6A
Description: Proclavaminate amidino hydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
arginase activity 6.53441421234691 bayes_pls_golite062009
agmatinase activity 3.73238467801147 bayes_pls_golite062009
protein deacetylase activity 2.683743388778 bayes_pls_golite062009
histone deacetylase activity 2.6392487803721 bayes_pls_golite062009
hydrolase activity 2.11707868768295 bayes_pls_golite062009
transcription regulator activity 1.92942976062235 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.72243397396987 bayes_pls_golite062009
catalytic activity 1.68836803454021 bayes_pls_golite062009
transcription factor binding 1.56550680716401 bayes_pls_golite062009
binding 1.5194054498194 bayes_pls_golite062009
deacetylase activity 1.51773975281732 bayes_pls_golite062009
transcription repressor activity 1.20889821261723 bayes_pls_golite062009
nucleic acid binding 1.01261954848505 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines 1.01223037319069 bayes_pls_golite062009
DNA binding 0.96206715898076 bayes_pls_golite062009
protein binding 0.725535842743004 bayes_pls_golite062009
enzyme binding 0.39566582482721 bayes_pls_golite062009
transcription factor activity 0.340376204573849 bayes_pls_golite062009
transcription cofactor activity 0.19637224511586 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 0.0917282383800223 bayes_pls_golite062009
transcription corepressor activity 0.0537224810780104 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle