YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262596, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	229 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262596, gi|....

Description	E-value	Query Range	Subject Range
gi\|65319915 - gi\|65319915\|ref\|ZP_00392874.1\| COG0819: Putative transcription activator [Bacillus anthracis str. A2... gi\|190563362, gi... - gi\|190565335\|ref\|ZP_03018255.1\| transcriptional activator TenA [Bacillus anthracis Tsiankovskii-I], ... gi\|229604132, gi... - gi\|229604132\|ref\|YP_002866915.1\| transcriptional activator TenA [Bacillus anthracis str. A0248], gi\|... gi\|228915196, gi... - gi\|228915196\|ref\|ZP_04078791.1\| Thiaminase-2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1], ... gi\|170685333, gi... - gi\|170685333\|ref\|ZP_02876557.1\| transcriptional activator TenA [Bacillus anthracis str. A0465], gi\|1... gi\|177649452, gi... - gi\|177649452\|ref\|ZP_02932454.1\| transcriptional activator TenA [Bacillus anthracis str. A0174], gi\|1... gi\|227003321, gi... - gi\|227814574\|ref\|YP_002814583.1\| transcriptional activator TenA [Bacillus anthracis str. CDC 684], g...	3.0E-62	[1..229]	[10..238]
gi\|47568738, gi\|... - gi\|47568738\|ref\|ZP_00239434.1\| transcriptional regulator [Bacillus cereus G9241], gi\|47554632\|gb\|EAL...	6.0E-62	[1..228]	[1..228]
gi\|51976351, gi\|... - gi\|52142882\|ref\|YP_083946.1\| transcriptional activator [Bacillus cereus E33L], gi\|51976351\|gb\|AAU179...	1.0E-61	[1..229]	[1..229]
gi\|218544969, gi... - gi\|218897569\|ref\|YP_002445980.1\| transcriptional activator TenA [Bacillus cereus G9842], gi\|21854496... gi\|29896230, gi\|... - gi\|30020678\|ref\|NP_832309.1\| transcriptional activator tenA [Bacillus cereus ATCC 14579], gi\|2989623... gi\|229127960, gi... - gi\|229127960\|ref\|ZP_04256944.1\| Thiaminase-2 [Bacillus cereus BDRD-Cer4], gi\|228655522\|gb\|EEL11376.1... gi\|228961939, gi... - gi\|228961939\|ref\|ZP_04123479.1\| Thiaminase-2 [Bacillus thuringiensis serovar pakistani str. T13001],...	2.0E-61	[1..228]	[1..228]
gi\|218903744, gi... - gi\|218903744\|ref\|YP_002451578.1\| transcriptional activator TenA [Bacillus cereus AH820], gi\|21853679... gi\|49330754, gi\|... - gi\|49479198\|ref\|YP_036717.1\| transcriptional activator [Bacillus thuringiensis serovar konkukian str... gi\|196043257, gi... - gi\|196043257\|ref\|ZP_03110495.1\| transcriptional activator TenA [Bacillus cereus 03BB108], gi\|1960255... gi\|196032097, gi... - gi\|196032097\|ref\|ZP_03099511.1\| transcriptional activator TenA [Bacillus cereus W], gi\|195994848\|gb\|...	2.0E-61	[1..229]	[1..229]
gi\|228901169, gi... - gi\|228901169\|ref\|ZP_04065371.1\| Thiaminase-2 [Bacillus thuringiensis IBL 4222], gi\|228858458\|gb\|EEN0... gi\|75764292, gi\|... - gi\|75764292\|ref\|ZP_00743832.1\| Transcriptional activator tenA [Bacillus thuringiensis serovar israel...	6.0E-61	[1..228]	[1..228]
gi\|89153949, gi\|... - gi\|89208099\|ref\|ZP_01186620.1\| TENA/THI-4 protein [Bacillus weihenstephanensis KBAB4], gi\|89153949\|g... gi\|228749296, gi... - gi\|229011882\|ref\|ZP_04169062.1\| Thiaminase-2 [Bacillus mycoides DSM 2048], gi\|228749296\|gb\|EEL99141.... gi\|228649847, gi... - gi\|229133447\|ref\|ZP_04262274.1\| Thiaminase-2 [Bacillus cereus BDRD-ST196], gi\|228649847\|gb\|EEL05855....	9.0E-60	[1..228]	[1..228]
gi\|165872451, gi... - gi\|165872451\|ref\|ZP_02217085.1\| putative transcriptional activator TenA [Bacillus anthracis str. A04... gi\|167635945, gi... - gi\|167635945\|ref\|ZP_02394252.1\| putative transcriptional activator TenA [Bacillus anthracis str. A04... gi\|167510695, gi... - gi\|167641304\|ref\|ZP_02399556.1\| putative transcriptional activator TenA [Bacillus anthracis str. A01... gi\|170666881, gi... - gi\|170689133\|ref\|ZP_02880331.1\| putative transcriptional activator TenA [Bacillus anthracis str. A04... gi\|170126480, gi... - gi\|170708594\|ref\|ZP_02899034.1\| putative transcriptional activator TenA [Bacillus anthracis str. A03... gi\|177654701, gi... - gi\|177654701\|ref\|ZP_02936489.1\| putative transcriptional activator TenA [Bacillus anthracis str. A01... gi\|51978057, gi\|... - gi\|52144588\|ref\|YP_082240.1\| transcriptional regulator of extracellular enzyme [Bacillus cereus E33L... gi\|47501157, gi\|... - gi\|47526009\|ref\|YP_017358.1\| transcriptional activator TenA, putative [Bacillus anthracis str. 'Ames... gi\|49177642, gi\|... - gi\|49183715\|ref\|YP_026967.1\| transcriptional activator TenA, putative [Bacillus anthracis str. Stern... gi\|21398688, gi\|... - gi\|65318151\|ref\|ZP_00391110.1\| COG0819: Putative transcription activator [Bacillus anthracis str. A2... gi\|30254322, gi\|... - gi\|30260873\|ref\|NP_843250.1\| transcriptional activator TenA, putative [Bacillus anthracis str. Ames]... gi\|190560025, gi... - gi\|190568788\|ref\|ZP_03021691.1\| putative transcriptional activator TenA [Bacillus anthracis Tsiankov... gi\|196046699, gi... - gi\|196046699\|ref\|ZP_03113922.1\| putative transcriptional activator TenA [Bacillus cereus 03BB108], g... gi\|254757117 - gi\|254757117\|ref\|ZP_05209145.1\| putative transcriptional activator TenA [Bacillus anthracis str. Aus... gi\|254753203 - gi\|254753203\|ref\|ZP_05205239.1\| putative transcriptional activator TenA [Bacillus anthracis str. Vol... gi\|254739864 - gi\|254739864\|ref\|ZP_05197556.1\| putative transcriptional activator TenA [Bacillus anthracis str. Kru... gi\|254735034 - gi\|254735034\|ref\|ZP_05192745.1\| putative transcriptional activator TenA [Bacillus anthracis str. Wes... gi\|254725861 - gi\|254725861\|ref\|ZP_05187643.1\| putative transcriptional activator TenA [Bacillus anthracis str. A10... gi\|254683074 - gi\|254683074\|ref\|ZP_05146935.1\| putative transcriptional activator TenA [Bacillus anthracis str. CNE... gi\|229266101, gi... - gi\|229601693\|ref\|YP_002865320.1\| putative transcriptional activator TenA [Bacillus anthracis str. A0... gi\|229120373, gi... - gi\|229120373\|ref\|ZP_04249620.1\| Transcriptional activator [Bacillus cereus 95/8201], gi\|228662958\|gb... gi\|228693414, gi... - gi\|229089789\|ref\|ZP_04221044.1\| Transcriptional activator [Bacillus cereus Rock3-42], gi\|228693414\|g... gi\|229022276, gi... - gi\|229022276\|ref\|ZP_04178817.1\| Transcriptional activator [Bacillus cereus AH1272], gi\|228739015\|gb\|... gi\|229016054, gi... - gi\|229016054\|ref\|ZP_04173008.1\| Transcriptional activator [Bacillus cereus AH1273], gi\|228745203\|gb\|... gi\|228815143, gi... - gi\|228944475\|ref\|ZP_04106846.1\| Transcriptional activator [Bacillus thuringiensis serovar monterrey ... gi\|228925912, gi... - gi\|228925912\|ref\|ZP_04088993.1\| Transcriptional activator [Bacillus thuringiensis serovar pondicheri... gi\|228846165, gi... - gi\|228913414\|ref\|ZP_04077045.1\| Transcriptional activator [Bacillus thuringiensis serovar pulsiensis... gi\|227816403, gi... - gi\|227816403\|ref\|YP_002816412.1\| putative transcriptional activator TenA [Bacillus anthracis str. CD... gi\|47558030, gi\|... - gi\|47564657\|ref\|ZP_00235701.1\| transcriptional regulator (tenA) [Bacillus cereus G9241], gi\|47558030... gi\|118476400, gi... - gi\|118476400\|ref\|YP_893551.1\| transcriptional activator [Bacillus thuringiensis str. Al Hakam], gi\|1...	2.0E-59	[1..223]	[1..225]
gi\|42779872, gi\|... - gi\|42779872\|ref\|NP_977119.1\| transcriptional activator TenA, putative [Bacillus cereus ATCC 10987], ... gi\|221238536, gi... - gi\|222094478\|ref\|YP_002528538.1\| transcriptional regulator of extracellular enzymes [Bacillus cereus... gi\|217066360, gi... - gi\|217958308\|ref\|YP_002336856.1\| putative transcriptional activator TenA [Bacillus cereus AH187], gi... gi\|206744585, gi... - gi\|206977269\|ref\|ZP_03238167.1\| putative transcriptional activator TenA [Bacillus cereus H3081.97], ...	3.0E-59	[1..223]	[1..225]

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Predicted Domain #1

Region A:
Residues: [1-229]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFSQSLRKE VDSIWEASFH HPFVKKLGEG TLDLANFRYY VLQDSYYLSH FARVQTLGAA  60
   61 KALELETTAR MAHHAQNTYE AELSLHENFA KKLGITQEEK DNFIPAPTAY AYTSHMYRAA 120
  121 YEGHLGDIIA AILPCYWLYY EIGERLKECQ PEEPIYNEWI SAYGSDWFRT LVEEQITRLD 180
  181 AIAEKVTESD RKRMKQHFVI SSQYEYSFWE MAYTLEKWPV DTEVKDVIR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	55.69897
Match:	1to9A
Description:	Crystal structure of THI-4 protein from Bacillus subtilis
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
transcription regulator activity	0.91081735217593	bayes_pls_golite062009
catalytic activity	0.846500584774474	bayes_pls_golite062009
binding	0.463801341295592	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: