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View Structure Prediction Details

Protein: gi|30256079, gi|...
Organism: Bacillus anthracis str. Ames
Length: 1064 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30256079, gi|....

Description E-value Query
Range
Subject
Range
gi|1769947 - gi|1769947|emb|CAA67095.1| SNF [Bacillus cereus ATCC 10987]
0.0 [1..1064] [1..1064]
gi|49332658, gi|... - gi|49481102|ref|YP_035985.1| SWF/SNF family helicase [Bacillus thuringiensis serovar konkukian str. ...
0.0 [1..1064] [1..1064]
gi|52143616, gi|... - gi|52143616|ref|YP_083212.1| SWF/SNF family helicase [Bacillus cereus E33L], gi|51977085|gb|AAU18635...
0.0 [1..1064] [1..1064]
gi|47557526, gi|... - gi|47565536|ref|ZP_00236577.1| Snf2 family protein [Bacillus cereus G9241], gi|47557526|gb|EAL15853....
0.0 [1..1064] [1..1064]
gi|30019888, gi|... - gi|30019888|ref|NP_831519.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579], gi|29895433|gb|AA...
gi|229127175, gi... - gi|229127175|ref|ZP_04256172.1| Helicase, SWF/SNF [Bacillus cereus BDRD-Cer4], gi|228656291|gb|EEL12...
0.0 [1..1064] [1..1064]
gi|89156908, gi|... - gi|89205165|ref|ZP_01183737.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Bacillus weihenstep...
0.0 [1..1064] [1..1068]
gi|152975221, gi... - gi|89201098|ref|ZP_01179845.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Bacillus cereus sub...
0.0 [5..1064] [2..1066]
gi|74492872, gi|... - gi|75759627|ref|ZP_00739712.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis A...
0.0 [1..885] [1..885]
gi|22778763, gi|... - gi|23100530|ref|NP_693997.1| helicase [Oceanobacillus iheyensis HTE831], gi|22778763|dbj|BAC15031.1|...
0.0 [4..1064] [3..1056]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFTLNKSII KEVCGETSYK RGEAYYKSNK VIVNHYDETK EICEATVKGN EDFHVTVEKA  60
   61 KKGDVVARCS CPSLASFQTY CQHVAAVLIQ INYNQQTGGM GSVSSRNDQL TNGMFQLFAD 120
  121 KPLRPKSKQH RFDTREILDV AFICSPVA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.841 0.043 helicase activity b.60.1 Lipocalins

Predicted Domain #2
Region A:
Residues: [149-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKSGGALLGI QLKLAKTYLI NHIREFLSKV EKRETFHYSN EFTYTPDIHS FKQETDVIIQ  60
   61 HLIKIYHNEK MYEDALEVHA KQDESMIFIP PASWNDMLSA LSRAEYVQLK QNEQLFHGLQ 120
  121 IS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [271-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGLLPLHFEF TKGNNGGFTL HIAGLNRVRV MEMYNNALYD GKLYHLPMED CMRLIELQKM  60
   61 MIRSNSNQFY IPENKMEHFV AKVVPGLMKL GTVRIDEGIS DRVETPSLKA KLYLDRVKNR 120
  121 LLAGLEFHYG NVVINPLEED GQPSVFNRDE KKEKEILDIM SESAFAKTEG GYFMHNEDAE 180
  181 YNFLYHIVPT LKGLVDIYAT TAIKLRIHKG DTAPLIRVRR KE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [493-609]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RIDWLSFRFD IKGIPEAEIK GVLVALEEKR KYYRLANGSL LSLESKEFNE INQFVKESGI  60
   61 RKEFLHGEEV NVPLIRSVKW MNGLHEGNVL SLDESVQDLV ESIQNPKKLK FTVPQTL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [610-1064]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RAVMREYQVY GFEWMKTLAY YRFGGILADD MGLGKTLQSI AYIDSVLPEI REKKLPILVV  60
   61 SPSSLVYNWL SELKKFAPHI RAVIADGNQA ERRKILKDVA EFDVVITSYP LLRRDIRSYA 120
  121 RPFHTLFLDE AQAFKNPTTQ TARAVKTIQA EYRFGLTGTP VENSLEELWS IFHVVFPELL 180
  181 PGRKEFGDLR REDIAKRVKP FVLRRLKEDV LKELPDKIEH LQSSELLPDQ KRLYAAYLAK 240
  241 LREETLKHLD KDTLRKNKIR ILAGLTRLRQ ICCHPALFVD DYKGSSAKFE QLLDILEECR 300
  301 STGKRILIFS QFTKMLSIIG RELNRQAIPY FYLDGNTPSQ ERVELCNRFN EGEGDLFLIS 360
  361 LKAGGTGLNL TGADTVILYD LWWNPAVEQQ AADRAYRMGQ KNTVQVIKLV AHGTIEEKMH 420
  421 ELQESKKNLI AEVIEPGEEK LSSITEEEIR DILMI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.154902
Match: 1z63A
Description: Sulfolobus solfataricus SWI2/SNF2 ATPase core in complex with dsDNA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle