YRC Public Data Repository - Protein Structure Prediction

Protein:	BDBC_COXBU
Organism:	Coxiella burnetii RSA 493
Length:	147 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BDBC_COXBU.

Description	E-value	Query Range	Subject Range
gi\|161761796, gi... - gi\|95927596\|ref\|ZP_01310351.1\| hypothetical protein CburR_01000540 [Coxiella burnetii RSA 331], gi\|1... gi\|94492161, gi\|... - gi\|94492161\|ref\|ZP_01299369.1\| hypothetical protein CburD_01000491 [Coxiella burnetii Dugway 7E9-12]...	189.0	[0..2]	[147..1]
gi\|152023214, gi... - gi\|89200501\|ref\|ZP_01179254.1\| Disulphide bond formation protein DsbB [Bacillus cereus subsp. cytoto...	155.0	[0..8]	[127..7]
BDBC2_BACC1 - Probable disulfide formation protein C 2 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=bdbC2 P... gi\|217956908, gi... - gi\|217956908\|ref\|YP_002336004.1\| disulfide bond formation protein C [Bacillus cereus AH187], gi\|2170... gi\|229035351, gi... - gi\|229035351\|ref\|ZP_04189257.1\| disulfide formation protein C 2 [Bacillus cereus AH1271], gi\|2287279... gi\|190015513, gi... - gi\|190015513\|ref\|YP_001967374.1\| disulfide oxidoreductase, DsbB family [Bacillus cereus], gi\|1165844... gi\|228641198, gi... - gi\|229142260\|ref\|ZP_04270782.1\| disulfide formation protein C 2 [Bacillus cereus BDRD-ST26], gi\|2286...	154.0	[0..7]	[134..4]
gi\|47566517, gi\|... - gi\|47566517\|ref\|YP_022469.1\| DsbB family disulfide bond formation protein [Bacillus anthracis str. '... gi\|21392881, gi\|... - gi\|21392881\|ref\|NP_652961.1\| DsbB family disulfide bond formation protein [Bacillus anthracis str. A... BDBC2_BACAN - Probable disulfide formation protein C 2 OS=Bacillus anthracis GN=bdbC2 PE=3 SV=1 gi\|254739184 - gi\|254739184\|ref\|ZP_05196886.1\| disulfide bond formation protein C [Bacillus anthracis str. Western ... gi\|254744983 - gi\|254744983\|ref\|ZP_05202660.1\| disulfide bond formation protein C [Bacillus anthracis str. Kruger B... gi\|227007922, gi... - gi\|227811626\|ref\|YP_002811637.1\| disulfide bond formation protein C [Bacillus anthracis str. CDC 684... gi\|254687696 - gi\|254687696\|ref\|ZP_05151552.1\| disulfide bond formation protein C [Bacillus anthracis str. CNEVA-90... gi\|254756382 - gi\|254756382\|ref\|ZP_05208411.1\| disulfide bond formation protein C [Bacillus anthracis str. Vollum] gi\|254762460 - gi\|254762460\|ref\|ZP_05214300.1\| disulfide bond formation protein C [Bacillus anthracis str. Australi... gi\|208743371 - gi\|208743371\|ref\|YP_002267822.1\| DsbB family disulfide bond formation protein [Bacillus cereus]	153.0	[0..6]	[134..3]
BDBC_BACSU - Disulfide bond formation protein C OS=Bacillus subtilis GN=bdbC PE=1 SV=1 gi\|221315624 - gi\|221315624\|ref\|ZP_03597429.1\| thiol-disulfide oxidoreductase [Bacillus subtilis subsp. subtilis st... BDBC_BACSU - Disulfide bond formation protein C OS=Bacillus subtilis (strain 168) GN=bdbC PE=1 SV=1 gi\|221320540 - gi\|221320540\|ref\|ZP_03601834.1\| thiol-disulfide oxidoreductase [Bacillus subtilis subsp. subtilis st... gi\|221324824 - gi\|221324824\|ref\|ZP_03606118.1\| thiol-disulfide oxidoreductase [Bacillus subtilis subsp. subtilis st...	153.0	[0..8]	[120..4]
gi\|52787227, gi\|... - gi\|52787227\|ref\|YP_093056.1\| BdbC [Bacillus licheniformis ATCC 14580], gi\|52349729\|gb\|AAU42363.1\| Bd...	152.0	[0..8]	[120..4]
BDBC_OCEIH - Probable disulfide formation protein OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCT... BDBC_OCEIH - Probable disulfide formation protein OS=Oceanobacillus iheyensis GN=bdbC PE=3 SV=1	149.0	[0..9]	[138..9]
BDBC_DEIRA - Probable disulfide formation protein OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM... BDBC_DEIRA - Probable disulfide formation protein OS=Deinococcus radiodurans GN=DR_0754 PE=3 SV=1	147.0	[0..8]	[134..3]
BDBC_CHLCV - Probable disulfide formation protein OS=Chlamydophila caviae (strain GPIC) GN=CCA_00587 PE=3 SV=1 BDBC_CHLCV - Probable disulfide formation protein OS=Chlamydophila caviae GN=CCA_00587 PE=3 SV=1	147.0	[0..3]	[137..1]

Back

Predicted Domain #1

Region A:
Residues: [1-147]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMVSRLLKNY SLYFAWLTAL IATLGSLYLS LVRHIPVCDL CWYQRVCIYP LTILLGIAAY  60
   61 RTDRGVVKYA LPLVVLGFLF SVYQYLQQMI PGFAPINLCG STSPHCSEIH WEIFGFITLP 120
  121 FLGMLATLIM SFFLIMAFYS LDKRLAN

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	6.37
Match:	2hi7B
Description:	No description for 2hi7B was found.

Predicted functions:

Term	Confidence	Notes
binding	0.772576200304996	bayes_pls_golite062009
catalytic activity	0.532570324528821	bayes_pls_golite062009
disulfide oxidoreductase activity	0.480030691760856	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: