| Protein: | gi|24375491, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 408 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24375491, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
388.0 | [0..4] | [406..173] |
|
|
381.0 | [0..18] | [406..127] |
|
|
370.0 | [0..4] | [406..57] |
|
|
365.0 | [0..1] | [406..37] |
|
|
365.0 | [0..1] | [406..37] |
|
|
364.0 | [0..4] | [406..40] |
|
Region A: Residues: [1-408] |
1 11 21 31 41 51
| | | | | |
1 MMKSLSTRIF IGLFTGLILG TLVQYFLNDI GFFSGNLVEL ASGVGTMFVN MIMMLVVPLV 60
61 FVSIVCGVCE LQDLKSFGRL GGKTFGFYIV NTVVAISTAL LVVLLLDPGK GVDMSSADGV 120
121 AITATELPSL IALLIDIVPR NPVAAFMSGN MLQVIFMALM LGGVMKSLGE HVAGAVQGFQ 180
181 TANKIMMKLI SVVMSLAPFG VFALMFKLGA TLDAAVFMSV LEYLVIILAL LLLWIFVVYP 240
241 LSVGMFTPIS AKTFRAKTQE QVLFSLSTAS SNATIPVTMR TLTEKLGVNR AVAGFGVPLG 300
301 ATMNMGGVAI YITIAIFFVA NAFGMPITSE QLPSLLFSIF LLSVGAGGVP GGGMVMIGVL 360
361 IHQMGLPIEA FAIVAALDRI IDMVLTSCNV VGDTAVLTIV DQTEKAVK
|
| Detection Method: |  |
| Confidence: | 82.154902 |
| Match: | 1xfhA |
| Description: | Structure of glutamate transporter homolog from Pyrococcus horikoshii |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| dicarboxylic acid transmembrane transporter activity | 5.4077039375589 | bayes_pls_golite062009 |
| carboxylic acid transmembrane transporter activity | 5.35323738672724 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 5.3122318185646 | bayes_pls_golite062009 |
| sodium:dicarboxylate symporter activity | 4.40071591934747 | bayes_pls_golite062009 |
| anion:cation symporter activity | 4.38991307992111 | bayes_pls_golite062009 |
| amino acid transmembrane transporter activity | 3.64519243918556 | bayes_pls_golite062009 |
| transporter activity | 3.59726235774831 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.48998062737764 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.25811511579861 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.16015523656183 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 3.11723298209538 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 2.90153102682056 | bayes_pls_golite062009 |
| organic acid:sodium symporter activity | 2.72996970117754 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.5316793478278 | bayes_pls_golite062009 |
| L-aspartate transmembrane transporter activity | 2.53126289198474 | bayes_pls_golite062009 |
| symporter activity | 2.37209552756137 | bayes_pls_golite062009 |
| solute:cation symporter activity | 2.37209552756137 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 2.36442337809135 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.31510944441012 | bayes_pls_golite062009 |
| L-amino acid transmembrane transporter activity | 2.2399865852858 | bayes_pls_golite062009 |
| C4-dicarboxylate transmembrane transporter activity | 2.22681603191212 | bayes_pls_golite062009 |
| acidic amino acid transmembrane transporter activity | 1.63992398037381 | bayes_pls_golite062009 |
| L-glutamate transmembrane transporter activity | 1.63992398037381 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 0.727865493684019 | bayes_pls_golite062009 |
| solute:sodium symporter activity | 0.63565466616857 | bayes_pls_golite062009 |
| solute:hydrogen symporter activity | 0.54912532283943 | bayes_pls_golite062009 |
