| Protein: | GLYA_SHEON |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 417 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLYA_SHEON.
| Description | E-value | Query Range |
Subject Range |
|
|
368.0 | [0..1] | [417..1] |
|
|
366.0 | [0..1] | [417..1] |
|
|
363.0 | [0..1] | [417..1] |
|
|
363.0 | [0..1] | [417..1] |
|
|
363.0 | [0..1] | [417..1] |
|
|
362.0 | [0..1] | [416..1] |
|
|
361.0 | [0..1] | [416..1] |
|
|
361.0 | [0..1] | [417..1] |
|
|
361.0 | [0..1] | [417..1] |
|
|
361.0 | [0..1] | [417..1] |
|
Region A: Residues: [1-417] |
1 11 21 31 41 51
| | | | | |
1 MLKKDMNIAD YDPELFNAIQ NETLRQEEHI ELIASENYTS PRVMQAQGSQ LTNKYAEGYP 60
61 GKRYYGGCEY VDVVETLAIE RAKQLFGATY ANVQPHSGSQ ANSAVYMALL KPGDTVLGMN 120
121 LAHGGHLTHG SPVNFSGRLY NIIPYGIDES GKIDYDEMER LAVEHKPKMM IGGFSAYSGI 180
181 VDWARMREIA DKIGAYLFVD MAHVAGLIAA GVYPNPVPHA HVVTSTTHKT LAGPRGGIIL 240
241 SAADDEELYK KLNSAVFPGG QGGPLMHVIA GKAVAFKEAL EPEFKTYQQQ VVNNAKAMVE 300
301 VFLERGYKIV SGGTSNHLML VDLIGRDLTG KEADAALGSA NITVNKNSVP NDPRSPFVTS 360
361 GVRIGTPAIT RRGFKEAEAK QLTGWICDIL DDAHNPAVIE RVKGQVLALC ARFPVYG
|
| Detection Method: |  |
| Confidence: | 94.0 |
| Match: | 1dfoA |
| Description: | Serine hydroxymethyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| L-aspartate:2-oxoglutarate aminotransferase activity | 3.359406422625 | bayes_pls_golite062009 |
| glycine dehydrogenase (decarboxylating) activity | 3.2128372762799 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | 3.2128372762799 | bayes_pls_golite062009 |
| transferase activity | 2.59075614411581 | bayes_pls_golite062009 |
| catalytic activity | 2.29878871754893 | bayes_pls_golite062009 |
| transferase activity, transferring nitrogenous groups | 1.28316822767388 | bayes_pls_golite062009 |
| transaminase activity | 1.24990480711889 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 1.19150094103499 | bayes_pls_golite062009 |
| transcription regulator activity | 1.07873942461292 | bayes_pls_golite062009 |
| O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 0.994935084630764 | bayes_pls_golite062009 |
| DNA binding | 0.886628214497634 | bayes_pls_golite062009 |
| nucleic acid binding | 0.814403324199462 | bayes_pls_golite062009 |
| structural molecule activity | 0.754675308623467 | bayes_pls_golite062009 |
| methyltransferase activity | 0.681623261233707 | bayes_pls_golite062009 |
| vitamin binding | 0.66463470119531 | bayes_pls_golite062009 |
| binding | 0.661198018681765 | bayes_pls_golite062009 |
| transcription factor activity | 0.615294010373048 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.60304280865376 | bayes_pls_golite062009 |
| 5-aminolevulinate synthase activity | 0.54326874956263 | bayes_pls_golite062009 |
| L-allo-threonine aldolase activity | 0.500744432308415 | bayes_pls_golite062009 |
| glycine hydroxymethyltransferase activity | 0.271623203801431 | bayes_pls_golite062009 |
| pyridoxal phosphate binding | 0.16957228630576 | bayes_pls_golite062009 |
| vitamin B6 binding | 0.16957228630576 | bayes_pls_golite062009 |
