Protein: | gi|24373055, gi|... |
Organism: | Shewanella oneidensis MR-1 |
Length: | 589 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24373055, gi|....
Description | E-value | Query Range |
Subject Range |
|
312.0 | [0..3] | [589..26] |
|
308.0 | [0..3] | [589..2] |
|
308.0 | [0..3] | [589..2] |
|
307.0 | [0..3] | [589..2] |
|
307.0 | [0..3] | [589..2] |
|
307.0 | [0..3] | [589..2] |
|
307.0 | [0..3] | [589..2] |
|
307.0 | [0..3] | [589..2] |
|
307.0 | [0..3] | [589..2] |
|
307.0 | [0..3] | [589..2] |
Region A: Residues: [1-176] |
1 11 21 31 41 51 | | | | | | 1 MEESSLLTSV LLFLLAAVIF VPLGKRFGAG PILSYLAAGV ILGPGGMALV SDPAAVLHFA 60 61 ELGVVLMLFV LGLELNPSKL WELRSAIFGL GSGQLLLSWA AIGGLAWGFG LSIEAALVVG 120 121 AALSLSSTAF AVQLMSEHRL LTTPLGRDAF GVLLMQDLAV IPMLLLTAYL APNSAQ |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [177-282] |
1 11 21 31 41 51 | | | | | | 1 IEHHAVPWYW TCVALIGFVL VGKYLLPRVL KLVASSGVRE VLTAFALLLV MGSAQLMEWL 60 61 GLSAGMGAFL AGIMLANSSY RHQLETDIEP FKGLLLGLFF MAVGMS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [283-589] |
1 11 21 31 41 51 | | | | | | 1 MDLKLFLTDP LLILAILLGM LLIKTLVLML LGRVRHHTWR PSIALGLILA EGGEFAFVLL 60 61 SQAQLSSIVD DKIAQILVLA IGLSMAVTPM IFTLFRATKP KVVDTRLPDT INVTESEVVI 120 121 AGFGRVGQIT GRILASSGIP FVALDKDASH VDVIRQYGGE VYFGDARRLD MLMSAGIARS 180 181 RLLLLAVDSV EDSIEIAQQV KTHFPHINII ARARDRNHAY RLMSLGVTDV FRETFGSALS 240 241 ASEKILQGLG LSQVQANERV KIFAEHDKKL VIASAAHQND LAKLIDLSNK GKAELESLMR 300 301 GDRENVS |
Detection Method: | |
Confidence: | 25.09691 |
Match: | 1lnqA |
Description: | Potassium channel-related protein MthK |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
potassium channel activity | 7.45561375804942 | bayes_pls_golite062009 |
voltage-gated potassium channel activity | 7.44058571110681 | bayes_pls_golite062009 |
voltage-gated cation channel activity | 7.3386698127529 | bayes_pls_golite062009 |
voltage-gated ion channel activity | 7.16469552587678 | bayes_pls_golite062009 |
voltage-gated channel activity | 7.14063840809955 | bayes_pls_golite062009 |
metal ion transmembrane transporter activity | 5.93188092092616 | bayes_pls_golite062009 |
cation channel activity | 5.49362429102263 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 5.13805155650973 | bayes_pls_golite062009 |
inward rectifier potassium channel activity | 5.0997110076666 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 5.04374327766634 | bayes_pls_golite062009 |
ion channel activity | 4.88752793243149 | bayes_pls_golite062009 |
gated channel activity | 4.87650815860853 | bayes_pls_golite062009 |
substrate-specific channel activity | 4.76774891791883 | bayes_pls_golite062009 |
channel activity | 4.7460548761362 | bayes_pls_golite062009 |
passive transmembrane transporter activity | 4.7460548761362 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 4.64120459994573 | bayes_pls_golite062009 |
hydrogen ion transmembrane transporter activity | 3.48222081117811 | bayes_pls_golite062009 |
monovalent inorganic cation transmembrane transporter activity | 2.96809690970616 | bayes_pls_golite062009 |
ligand-gated ion channel activity | 2.94075163359893 | bayes_pls_golite062009 |
ligand-gated channel activity | 2.94075163359893 | bayes_pls_golite062009 |
transporter activity | 2.93091397928047 | bayes_pls_golite062009 |
transmembrane transporter activity | 2.82224868778929 | bayes_pls_golite062009 |
substrate-specific transporter activity | 2.79688978937497 | bayes_pls_golite062009 |
inorganic cation transmembrane transporter activity | 2.13014428099026 | bayes_pls_golite062009 |
potassium ion transmembrane transporter activity | 1.34449386905866 | bayes_pls_golite062009 |
catalytic activity | 1.03099072397093 | bayes_pls_golite062009 |
active transmembrane transporter activity | 0.239024094835991 | bayes_pls_golite062009 |