| Protein: | LAM6_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 693 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAM6_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..693] | [1..693] |
|
|
0.0 | [158..652] | [11..556] |
|
|
0.0 | [156..652] | [9..559] |
|
|
0.0 | [112..571] | [149..593] |
|
|
8.0E-93 | [100..533] | [109..540] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MWGDSMRELG DAMDNELNAV KPVVEEGGMD GARKFIKGKS FQKSSTEHML ISPGRDGSVP 60
61 LNGLKSSPAD PHLSDVNSIL DNHRGGGETA LTSVNNIIMA TSTNGDSDGV DG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [113-275] |
1 11 21 31 41 51
| | | | | |
1 DAKRPSISNC SSRSSFFDTV LSTFSLKSNS QDTVTNEVKN IEVQFASEEA NKKFRQMFKP 60
61 LAPNTRLITD YFCYFHREFP YQGRIYLSNT HLCFNSTVLN WMAKLQIPLN EIKYLDKVTT 120
121 NSSAISVETV TNRYTFSGFI ARDEVFQLIT RVWSKENLTN IND
|
| Detection Method: | |
| Confidence: | 28.142668 |
| Match: | PF02893 |
| Description: | GRAM domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 1.37262912917599 | bayes_pls_golite062009 |
| protein binding | 1.01923599216718 | bayes_pls_golite062009 |
|
Region A: Residues: [276-353] |
1 11 21 31 41 51
| | | | | |
1 VLEVDERVSK KKGISSTPSS IFNNVSTNAY NDFISTTTTE PTSRASYMSE NDMLIEEAIR 60
61 SVDDYMGTPR ASPSSSSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [354-588] |
1 11 21 31 41 51
| | | | | |
1 SSSSSSSLGS STTYYCRPVY RLKPNAPFQY EGPFHVQETM DFPYKPEANN EYVLLERQFS 60
61 VPPGLLFIMM FNEDNPVFEL SFLKTQDSSN ISHIGTFEKV NKDGQHYREF QYTKQLHFPV 120
121 GPKSTNCEVA EILLHCDWER YINVLSITRT PNVPSGTSFS TRTRYMFRWD DQGQGCILKI 180
181 SFWVDWNASS WIKPMVESNC KNGQISATKD LVKLVEEFVE KYVELSKEKA DTLKP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 0.240804061374211 | bayes_pls_golite062009 |
| catalytic activity | 0.0521786759115963 | bayes_pls_golite062009 |
|
Region A: Residues: [589-693] |
1 11 21 31 41 51
| | | | | |
1 LPSVTSFGSP RKVAAPELTM VQPESKPEAE AEISEIGSDR WRFNWVNIII LVLLVLNLLY 60
61 LMKLNKKMDK LTNLMTHKDE VVAHATLLDI PAKVQWSRPR RGDVL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.807 | 0.886 | cytoplasm | a.1.1 | Globin-like |
