Protein: | PCF11_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 626 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PCF11_YEAST.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..626] | [1..626] |
|
0.0 | [11..620] | [7..575] |
|
6.0E-86 | [224..605] | [36..392] |
|
3.0E-85 | [236..609] | [38..365] |
|
1.0E-83 | [153..618] | [61..488] |
|
4.0E-81 | [236..609] | [38..401] |
|
3.0E-78 | [153..618] | [1157..1596] |
Region A: Residues: [1-117] |
1 11 21 31 41 51 | | | | | | 1 MDHDTEVIVK DFNSILEELT FNSRPIITTL TKLAEENISC AQYFVDAIES RIEKCMPKQK 60 61 LYAFYALDSI CKNVGSPYTI YFSRNLFNLY KRTYLLVDNT TRTKLINMFK LWLNPND |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Term | Confidence | Notes |
binding | 3.44539235794744 | bayes_pls_golite062009 |
transcription regulator activity | 2.34092044533955 | bayes_pls_golite062009 |
protein binding | 1.97365365208963 | bayes_pls_golite062009 |
nucleic acid binding | 1.74252996786746 | bayes_pls_golite062009 |
DNA binding | 1.73786982174918 | bayes_pls_golite062009 |
transcription factor activity | 1.0565013251721 | bayes_pls_golite062009 |
clathrin binding | 0.196939581490181 | bayes_pls_golite062009 |
Region A: Residues: [118-460] |
1 11 21 31 41 51 | | | | | | 1 TGLPLFEGSA LEKIEQFLIK ASALHQKNLQ AMLPTPTVPL LLRDIDKLTC LTSERLKNQP 60 61 NDEKLKMKLL VLSQLKQELK REKLTLNALK QVQMQLRQVF SQDQQVLQER MRYHELQQQQ 120 121 QQQQQQQQQQ QQQQQQYHET KDMVGSYTQN SNSAIPLFGN NSDTTNQQNS LSSSLFGNIS 180 181 GVESFQEIEK KKSLNKINNL YASLKAEGLI YTPPKESIVT LYKKLNGHSN YSLDSHEKQL 240 241 MKNLPKIPLL NDILSDCKAY FATVNIDVLN NPSLQLSEQT LLQENPIVQN NLIHLLYRSK 300 301 PNKCSVCGKR FGNSESEKLL QNEHLDWHFR INTRIKGSQN TAN |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [461-514] |
1 11 21 31 41 51 | | | | | | 1 TGISNSNLNT TTTRKNIQSR NWYLSDSQWA AFKDDEITST KHKNDYTDPH ANKN |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [515-626] |
1 11 21 31 41 51 | | | | | | 1 IDKSALNIHA DENDEGSVDN TLGSDRSNEL EIRGKYVVVP ETSQDMAFKC PICKETVTGV 60 61 YDEESGEWVW KNTIEVNGKY FHSTCYHETS QNSSKSNSGK VGLDDLKKLV TK |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.