Protein: | NOC3_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 663 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NOC3_YEAST.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..663] | [1..663] |
|
0.0 | [4..657] | [68..713] |
|
0.0 | [4..657] | [68..714] |
|
0.0 | [39..655] | [121..742] |
|
0.0 | [22..657] | [88..706] |
|
0.0 | [286..657] | [4..345] |
|
5.0E-93 | [128..663] | [4..516] |
Region A: Residues: [1-111] |
1 11 21 31 41 51 | | | | | | 1 MAKRNRSQFR IQERTAKKRK HEDSLLEGNV FQNAPEDMDE NTIYSAKGSS WDEEEQDYEM 60 61 VPRKNRSDTS NLVEGLPIKV NGKVERKLHK AQEKPKDDDE EDEDSNDSSE D |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.212 | a.18.1 | T4 endonuclease V |
Term | Confidence | Notes |
RNA binding | 3.36069436734718 | bayes_pls_golite062009 |
binding | 2.36800795249393 | bayes_pls_golite062009 |
nucleic acid binding | 1.67566088591721 | bayes_pls_golite062009 |
structural molecule activity | 1.49650156618775 | bayes_pls_golite062009 |
protein binding | 1.3800948965226 | bayes_pls_golite062009 |
mRNA binding | 1.35186555044783 | bayes_pls_golite062009 |
transcription regulator activity | 1.08645493064764 | bayes_pls_golite062009 |
DNA binding | 0.806448013051712 | bayes_pls_golite062009 |
transcription factor activity | 0.371244009721798 | bayes_pls_golite062009 |
Region A: Residues: [112-263] |
1 11 21 31 41 51 | | | | | | 1 DEGPNEEQEA EAKEDEPDTE EKILQLKEDI ADLVTKVMEE PEENTAALGR LCKMVESKNP 60 61 NTCKFSMLAL VPVFKSIIPG YRIRPLTETE KKEKVSKEVS KLRNFEQALV YNYKNYVGRL 120 121 QSLSKTPSNA APIQVSLGIL ATQAAKELIS TA |
Detection Method: | |
Confidence: | 9.86 |
Match: | 1b3uA |
Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [264-329] |
1 11 21 31 41 51 | | | | | | 1 SHFNFRTDIF TLLLRRICKP RISTDPTSIQ IIQTFETLLN EDEEGSISFE ILRIFNKILK 60 61 TRNFNI |
Detection Method: | |
Confidence: | 9.86 |
Match: | 1b3uA |
Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [330-470] |
1 11 21 31 41 51 | | | | | | 1 EESVLNMLLS LDVLHDYDPN TKLKGNVSAP KLKKKDRVHL SKKQRKARKE MQQIEEEMRN 60 61 AEQAVSAEER ERNQSEILKI VFTIYLNILK NNAKTLIGSV LEGLTKFGNM ANFDLLGDFL 120 121 EVMKELISDT EFDNLSSAEV R |
Detection Method: | |
Confidence: | 9.86 |
Match: | 1b3uA |
Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [471-663] |
1 11 21 31 41 51 | | | | | | 1 KALLCIVSAF SLISNTQYMK VNVDLSKFVD GLYALLPYIC LDADIELSYR SLRLADPLNN 60 61 EIIKPSVNVS TKAELLLKAL DHVFFRSKSG TKERATAFTK RLYMCISHTP EKTSIAILKF 120 121 IDKLMNRYPE ISGLYSSEDR IGNGHFIMEA DNPSRSNPEA ATLWDNALLE KHYCPVVTKG 180 181 LRSLSSRSKE CSK |
Detection Method: | |
Confidence: | 9.86 |
Match: | 1b3uA |
Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
Matching Structure (courtesy of the PDB): |