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View Structure Prediction Details

Protein: AGD12_ARATH
Organism: Arabidopsis thaliana
Length: 337 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGD12_ARATH.

Description E-value Query
Range
Subject
Range
gi|110738686 - gi|110738686|dbj|BAF01268.1| hypothetical protein [Arabidopsis thaliana]
235.0 [0..1] [337..1]

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Predicted Domain #1
Region A:
Residues: [1-60]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYSGAGLGK PGSGKRRIRD LLTQSDNRVC ADCGAPDPKW ASANIGVFIC LKCCGVHRSL  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 2iqjA
Description: No description for 2iqjA was found.

Predicted Domain #2
Region A:
Residues: [61-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFI PEGSSKPGPD ASHDQRMRFI  60
   61 RSKYEHQEFL KPSLRITSVR GSSTKTPAFL SSSLSKKIVD SFRTNSSSQQ PQLEGMVEFI 120
  121 GLLKVTIKKG TNMAIRDMMS SDPYVVLTLG QQKAQSTVVK SNLNPVWNEE LMLSVPHNYG 180
  181 SVKLQVFDYD TFSADDIMGE AEIDIQPLIT SAMAFGDPEM FGDMQIGKWL KSHDNALIED 240
  241 SIINIADGKV KQEVQIKLQN VESGELELEM EWLPLEQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.39794
Match: 2fjuB
Description: No description for 2fjuB was found.

Predicted functions:

Term Confidence Notes
binding 0.0816027554254649 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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