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View Structure Prediction Details

Protein: cdr-5
Organism: Caenorhabditis elegans
Length: 279 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cdr-5.

Description E-value Query
Range
Subject
Range
cdr-6 - glutathione S-transferase status:Confirmed UniProt:Q18830 protein_id:CAA99802.1
208.0 [0..3] [279..1]

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Predicted Domain #1
Region A:
Residues: [1-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILEIIAGII IILFIFNLLH TIYKTFLTTP TVNATPKIHK RDYQKDVVYL YQFPRIDTVP  60
   61 NLSSFCLKTE TFLRAFKIPH EVIETGSLRS RNGTLPFVEL NGEHIPDSDL IEVRLRKHFQ 120
  121 IPNLSAEDES HATALCRLAD NHLLSIIIKY KAAEDAWYSA LLRGVPGPNC LKTILKPIVR 180
  181 KLFMKKVHER TGGAIGNFTE DEAEMLCHKD LQAIQDSIKG KYLFGDKITS ADCTVFGEVA 240
  241 SAYYPFPNKF SRIIDSHYPK LHEYCDRIIE ELYPNDFSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.221849
Match: 1e6bA
Description: Class zeta GST
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.158183295732202 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle