| Protein: | gi|16805183, gi|... |
| Organism: | Plasmodium falciparum 3D7 |
| Length: | 955 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16805183, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
383.0 | [0..697] | [950..180] |
|
|
382.0 | [0..697] | [950..219] |
|
|
378.0 | [0..632] | [949..125] |
|
|
373.0 | [0..697] | [950..344] |
|
|
369.0 | [0..697] | [950..144] |
|
|
369.0 | [0..697] | [950..153] |
|
|
368.0 | [0..697] | [950..155] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MVTGGQGKLN QKNQKGDKKN LSYDNKINNN INISVVEKSE GNYKESYVFY KKDMCDENNN 60
61 ISNMEGIDQF HNCNNEQKKI DTTTITTYNN NINSSSNNNY NNDYDIDENN NFHCHDDDHK 120
121 HLDN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [125-258] |
1 11 21 31 41 51
| | | | | |
1 YCVKDDYSHE DNDQCHVCNT VDMLNLEEER HFCNVCFSFL YYKKYCFYEL LRIYKNYSCL 60
61 NEEEKNLLTE SIYAKLYKMY LTTLNNYYFI LNILLPQIST HIIIHLLTFT FHKPEEDEHM 120
121 KEEYVMNEII NKLT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.862 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
|
Region A: Residues: [259-354] |
1 11 21 31 41 51
| | | | | |
1 NQELNNIDKV YNYHNFNVRL LCKDDALIIL NEIRSKMINS QNEKKIVDML NMKCGDVIVD 60
61 DKNGSDKDSG NNDIHNKDIH NKYDDNMDSS DKSSCN
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [355-696] |
1 11 21 31 41 51
| | | | | |
1 KNSCDNHCDN HCDNHSDNHC DNHSDNHCDN HCDNHCDNHC DNHCDNHCDN HCDNHCDNHC 60
61 DNHCDNHCDN HCDNHCDNHC DNHCDNHCDN HSDNHCDNHC DNHCDNHCDN HCDNHCDNHC 120
121 DNHSDNHCDN HCDNHSDNHC DNHCDNHSDN HCDNHCDNHC DNHCDNHCDN HCDNHCDNHC 180
181 DNHCDNHCDN HCDNHCDNHC DNHCDNHCDN HCDNHCDNNK MNRTHLMNSN TKGDDQTCKN 240
241 TNEYSDTSSN HYCNNIEEDT YNVVNPGVDL DVHNIIDSKN IKDYHNDIKE NMCNNNKTLH 300
301 ADENMPNDNI CARENNSKYE HTPPGMRISQ AYTPTLDDYN LI
|
| Detection Method: | |
| Confidence: | 32.522879 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
|
Region A: Residues: [697-955] |
1 11 21 31 41 51
| | | | | |
1 QNMSKVRSTL RQFVRDWSME GQEERDKAYI PLINSLDKYL PIHDNYIPKI LCPGSGLGRL 60
61 PYEIAKKGYR SQGNEFSYFM LLGSNFILNY YNEKYSLSIH PYCLCTSNRR GRDDHLKIIQ 120
121 LPDVNTYNKI VLNTDFSMCA GELIEVYYYD KEYFDGVLTC FFLDTAKNLF MYIRTFASIL 180
181 KPNSLWSNIG PLLYHYAEMP NEMSIELAWD EIQIIISKWF TIKEIKWIDN YYTTNFDSMM 240
241 QVQYHCVFFS AIRNDIPVD
|
| Detection Method: | |
| Confidence: | 1.89 |
| Match: | 2bzgA |
| Description: | Crystal structure of thiopurine S-methyltransferase. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.639646908254091 | bayes_pls_golite062009 |
| transferase activity | 0.394707018913607 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.0810339077201343 | bayes_pls_golite062009 |
| methyltransferase activity | 0.0737551340470768 | bayes_pls_golite062009 |
