| Protein: | gi|110735706, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 271 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110735706, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
292.0 | [0..1] | [269..1] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MVGWKRNLQT VIRQVGRRVK NSHISTANYS SSTRNLESPF SQGYLQSLLR PSYSSRPLYH 60
61 HLQQLGISTS RQLQASEEPV SSPLSSPAL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.583 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.511 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.494 | d.58.48 | MTH1187-like |
| View | Download | 0.489 | a.64.1 | Saposin |
| View | Download | 0.473 | a.35.1 | lambda repressor-like DNA-binding domains |
|
Region A: Residues: [90-271] |
1 11 21 31 41 51
| | | | | |
1 LGSGKEEEQK IIPKRQKVQA VLKSIKQSPK KVNLVAALVR GMRVEDALIQ LQVTVKRAAQ 60
61 TVYRVIHAAR ANATHNHGLD PDRLLVAEAF VGKGLFGKKV AYHAKGRSGI ISIPRCRLTV 120
121 IVRETTPEEE AEIARLKVHN FKKKSKRERQ LVPHKLIETS PIWNRRGTKA NHRSSELVRS 180
181 SH
|
| Detection Method: | |
| Confidence: | 34.39794 |
| Match: | 1j5aL |
| Description: | 50S subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 9.71138472170121 | bayes_pls_golite062009 |
| structural molecule activity | 9.13471776263155 | bayes_pls_golite062009 |
| binding | 0.861343702064253 | bayes_pls_golite062009 |
| protein binding | 0.15396157891606 | bayes_pls_golite062009 |
