| Protein: | SEBP2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 487 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEBP2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
773.0 | [0..13] | [487..136] |
|
Region A: Residues: [1-209] |
1 11 21 31 41 51
| | | | | |
1 MATETVLATA VSNGKSKGCC KSGPGYATPL AAMAGPREKL IYVTALYSGT GRDKPDYLAT 60
61 VDVDPSSPTF SSVIHRLKMP YIGDELHHTG WNSCSSCHGD ASADRRYLVL PGLISGRIYA 120
121 IDTKTDPKAP SLYKVVEPKE IAEKTGLAFP HTSHCLASGD MLVSCLGDKE GNAKGNGFLL 180
181 LDSDFNVKSR WDKPGHGPLF GYDFWYQPR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [210-487] |
1 11 21 31 41 51
| | | | | |
1 FKTMISTSWG APKAFSKGFN LQHVADGLYG SHLHIYQWPE GEMKQIIDLG NTGLLPLEIR 60
61 FLHDPSKDTG YVGSALSSNM IRFFKNSDDT WSHEVVISVK PLKVENWILP EMPGLITDFL 120
121 ISLDDRFFYF VNWLHGDIRQ YNIEDPKNPV LTGQIWVGGL LQKGSPYKAV GEDGNTYQFD 180
181 VPQIKGKSLR AGPQMIQLSL DGKRLYATNS LFSAWDRQFY PEIMEKGSHI IQIDVDTDKG 240
241 GLTLNPDFFV DFGDEPDGPA LAHEMRYPGG DCTSDIWI
|
| Detection Method: | |
| Confidence: | 22.39794 |
| Match: | 1l0qA |
| Description: | Surface layer protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.565955069185473 | bayes_pls_golite062009 |
| protein binding | 0.188092612225384 | bayes_pls_golite062009 |
