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View Structure Prediction Details

Protein: ILL6_ARATH
Organism: Arabidopsis thaliana
Length: 464 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ILL6_ARATH.

Description E-value Query
Range
Subject
Range
gi|3559811 - gi|3559811|emb|CAA09330.1| gr1-protein [Arabidopsis thaliana]
380.0 [0..1] [464..1]

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Predicted Domain #1
Region A:
Residues: [1-464]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNLRKLNLL SVSLTIIFVS LTIATNLPFF EVKYPNNNPF GMLLRPTPIK NQSLGLPAHV  60
   61 GSDECRVWTK ACSDEILRLT YQPDNVAWLK RVRRTIHENP ELAFEEYETS RLIRSELDRM 120
  121 GIMYRYPLAK TGIRAWIGSG GPPFVAVRAD MDALPIQEAV EWEHISKVAG KMHACGHDAH 180
  181 VTMLLGAAHI LKAREHLLKG TVVLLFQPAE EAGNGAKNMI EDGALDDVEA IFAVHVSHIH 240
  241 PTGVIGSRSG PLLAGCGIFR AVITSEDSRG AANLLLAASS AVISLQGIVS REASPLDSQV 300
  301 VSVTSFDGGH SLDVAPDTVV LGGTFRAFSN SSFYYLKKRI QEVLMDQVGV FGCQATVNFF 360
  361 EKQNAIYPPT TNNDATYNHL KKVTIDLLGD SHFTLAPQMM GAEDFAFYSE IIPAAFYFIG 420
  421 IRNEELGSVH IAHSPHFMID EDSLPVGAAV HAAVAERYLN DKHS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.69897
Match: 1xmbA
Description: X-RAY STRUCTURE OF IAA-AMINOACID HYDROLASE FROM ARABIDOPSIS THALIANA GENE AT5G56660
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.0609849976664 bayes_pls_golite062009
peptidase activity 3.04706302825019 bayes_pls_golite062009
catalytic activity 2.3710874246093 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.30644893326426 bayes_pls_golite062009
exopeptidase activity 1.25673143627992 bayes_pls_golite062009
carboxypeptidase activity 0.76593160329727 bayes_pls_golite062009
succinyl-diaminopimelate desuccinylase activity 0.0189053170666407 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle