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View Structure Prediction Details

Protein: NRX3_ARATH
Organism: Arabidopsis thaliana
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NRX3_ARATH.

Description E-value Query
Range
Subject
Range
gi|113565386, gi... - gi|115460430|ref|NP_001053815.1| Os04g0608600 [Oryza sativa (japonica cultivar-group)], gi|113565386...
233.0 [0..1] [384..1]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSADYQVK FPESGDLYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SAIWCRPCKD  60
   61 FTPELIKLYE NLQNRGEELE IIFVSFDHDM TSFYEHFWCM PWLAVPFNLS LLNKLRDKYG 120
  121 ISRIPSLVPL YSDEISVAED VIGLIEDYGS EAFPFTKKRK EELKAIDDSK RLGGQLEKLL 180
  181 THESRNYVVA R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.0
Match: 2cv4A
Description: Crystal Structure of an Archaeal Peroxiredoxin from the Aerobic Hyperthermophilic Crenarchaeon Aeropyrum pernix K1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [192-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGSKVLVSKL VGKTIGLYFG AHWCPPFRSF TSQLVDVYNE LATTDKGSFE VILISTDRDS  60
   61 REFNINMTNM PWLAIPYEDR TRQDLCRIFN VKLIPALVII GPEEKTVTTN AREMVSLYGS 120
  121 RSFP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1o73A
Description: Tryparedoxin I
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [316-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTESRIVELK ACLKKEGDSL PRKVKDNKHE HELKLDMAKA YVCDFCKKQG RFWAFSCNAC  60
   61 DYDLHPTCVE EEEALLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.522879
Match: 1v5nA
Description: Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.536326941789505 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle