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View Structure Prediction Details

Protein: SCP15_ARATH
Organism: Arabidopsis thaliana
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP15_ARATH.

Description E-value Query
Range
Subject
Range
SCP3_ARATH - Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1
545.0 [0..3] [436..8]

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Predicted Domain #1
Region A:
Residues: [1-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASWIFKLLL LLQCVLVLIQ HADSSSIIRY LPGFEGPLPF ELETGYIGVG QKEEDQLFYY  60
   61 FIKSENNPEE DPLLVWLTGG PGCSSFSGLV YENGPLAFKV ETYNGSVPTL VSTTYSWTKV 120
  121 ANIIYLDQPV GTGFSYSRNP FADIPSDTGS VKRVNEFVRK WLAKHPEYFS NPFYVTGNSY 180
  181 SGKVIPAIVQ EISNGNYICC KPQINLQGYV IGNPVAYYDH DKDFRIPFAH GVALISDELF 240
  241 ESLKASCGGS YSVVDPLNTE CLKLIEDYDK CVSGIYEELI LKSKCEHTSP DCYTYRYLLS 300
  301 EYWADNETVR RALKVVKGSK GTWERCDYRV LSNQDIKSSI PFHINNSIRG YRSLVISGDH 360
  361 DMTIPFLGTQ AWIRSLNYSI TEKWRPWMIL DQVAGYTKTY ANKMTLATVK GGGHTLEYKP 420
  421 EENSVLFKRW ISGQPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.12335967816646 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.55159061470324 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.815337671271829 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
binding 0.351031277062254 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle