YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49653621, gi\|...
Organism:	Debaryomyces hansenii CBS767
Length:	149 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49653621, gi|....

Description	E-value	Query Range	Subject Range
gi\|38108535, gi\|... - gi\|39968859\|ref\|XP_365820.1\| hypothetical protein MGG_02522 [Magnaporthe grisea 70-15], gb\|EAA54537....	164.0	[0..2]	[121..19]
gi\|85080891 - gi\|85080891\|ref\|XP_956625.1\| hypothetical protein NCU01841 [Neurospora crassa OR74A] gi\|28881231, gi\|... - gi\|32415603\|ref\|XP_328280.1\| predicted protein [Neurospora crassa], gi\|28917696\|gb\|EAA27389.1\| conse...	151.0	[0..1]	[107..12]
gi\|169604594, gi... - gi\|169604594\|ref\|XP_001795718.1\| hypothetical protein SNOG_05311 [Phaeosphaeria nodorum SN15], gi\|11...	143.0	[0..9]	[118..24]
gi\|42545662, gi\|... - gi\|46109336\|ref\|XP_381726.1\| hypothetical protein FG01550.1 [Gibberella zeae PH-1], gi\|42545662\|gb\|E...	128.0	[0..12]	[107..28]
gi\|114188929, gi... - gi\|115402013\|ref\|XP_001217083.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	123.0	[0..6]	[103..29]
gi\|90302101, gi\|... - gi\|90302101\|gb\|EAS31732.1\| hypothetical protein CIMG_07211 [Coccidioides immitis RS], gi\|119184935\|r...	120.0	[0..12]	[102..36]
gi\|71004202, gi\|... - gi\|71004202\|ref\|XP_756767.1\| hypothetical protein UM00620.1 [Ustilago maydis 521], ref\|XP_398235.1\| ...	118.0	[0..5]	[126..31]
gi\|40745998, gi\|... - gi\|67521882\|ref\|XP_659002.1\| hypothetical protein AN1398.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	117.0	[0..8]	[75..31]
DAD2_KLULA - DASH complex subunit DAD2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 12... DAD2_KLULA - DASH complex subunit DAD2 OS=Kluyveromyces lactis GN=DAD2 PE=3 SV=1	113.0	[0..11]	[121..2]
gi\|88179236, gi\|... - gi\|88179236\|gb\|EAQ86704.1\| hypothetical protein CHGG_07957 [Chaetomium globosum CBS 148.51], gi\|1161...	111.0	[0..1]	[107..18]

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Predicted Domain #1

Region A:
Residues: [1-149]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRRTVLKST HIQQKIAEKK AELENLNEIK KFTSILTNQL DELENKLDYM AEGTESVALV  60
   61 LSNWQNVVKS VSLASLGLLK YSEKDYETGA PLPECLVRIK LDKDDNVGEE IQEKEEMETD 120
  121 DYILDQQAEE SENINEEEDR QEVQTSYTD

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	54.638272
Match:	PF08654.1
Description:	No description for PF08654.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.883	0.209	microtubule	a.25.1	Ferritin-like

Predicted functions:

Term	Confidence	Notes
binding	2.27598967756373	bayes_pls_golite062009
nucleic acid binding	0.372697724917657	bayes_pls_golite062009
protein binding	0.356759891106343	bayes_pls_golite062009
DNA binding	0.325837947710278	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: