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View Structure Prediction Details

Protein: SCP1_ARATH
Organism: Arabidopsis thaliana
Length: 441 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP1_ARATH.

Description E-value Query
Range
Subject
Range
SCP3_ARATH - Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1
568.0 [0..1] [441..1]

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Predicted Domain #1
Region A:
Residues: [1-441]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANKYVSSVL KSLLVLLHLV FLSKQHVDSA SIVKSLPGFE GQLPFELETG YIGVGEEEEV  60
   61 QLFYYFIKSE RNPKEDPLIL WLTGGPGCSA ISGLLFENGP LTMKLDVYNG TLPSLVSTTY 120
  121 SWTKTSSIIF LDQPVGTGFS YSRTQQFNKP SDSGEAKRIH EFLQKWLGKH QVFSSNPFYV 180
  181 AGDSYSGLVV PATVQEISKG NYECCNPPIN LQGYVLGNPL TDYTTGSNSR IPFAHGMALI 240
  241 SDELYESLKK TCKGEYTNVH PRNTQCLKFV EEFNKCTNRI FQQLILDPLC ETETPDCYIY 300
  301 RYLLTTYWAN DATVREALQI NKESIGEWVR CYYSIPYNND IKSSMPYHVN NSISGYRSLI 360
  361 YSGDHDFEVP YLGTQAWIRS LNYSIIDDWR PWMVKNQIAG YTRTYANKMT FATIKGGGHT 420
  421 AESKPEEASI MFQRWINGQP L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 108.0
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.12335967816646 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.55159061470324 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.815337671271829 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
binding 0.351031277062254 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle