| Protein: | gi|20856761, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 526 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20856761, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
268.0 | [0..1] | [526..1] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MKQNETFDQE REDLYHTFDE EDEESQTESS VPSTPLSRNR SEDVPVPWPR SYRQSMDLLT 60
61 GVTPPTSTSF VSSFRQRRQS SVFGSFTSSP SKQQLLIDKD EIQSSVVSSI KSFLASHLQL 120
121 SVPGDLL
|
| Detection Method: |  |
| Confidence: | 1.22 |
| Match: | 1sa1E |
| Description: | TUBULIN-PODOPHYLLOTOXIN: STATHMIN-LIKE DOMAIN COMPLEX |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.80712668888483 | bayes_pls_golite062009 |
| protein binding | 0.25520383752473 | bayes_pls_golite062009 |
|
Region A: Residues: [128-526] |
1 11 21 31 41 51
| | | | | |
1 TPQENRSCTF SQSVLNGINV LCGVALLTMP YAVKEGGWLG LFILFSFGII TFYTGILLKR 60
61 CLENSPGIHT YPDIGQAAFG TTGRILVSIL LYVELYASCV EYIIMMSDNL SRMFPNTSLY 120
121 INGFSLDSTQ VFAITTTLIV LPTVWLKDLS LLSYLSAGGV ISSILLALCL FWAGSVDGVG 180
181 FHISGQALDI TNIPVAIGIY GFGFGSHSVF PNIYSSMKEP SKFPTVLLIS FAFCTLFYIA 240
241 VAVCGFTMFG DAIQSQFTLN MPPHFTSSKI AVWTAVVTPM TKYALTITPV MLSLEELIPS 300
301 SSRKMRSKGV SMLFRTILVL STLVVALTVP FFATVAALIG SFIAMLIALI FPCLCYISIM 360
361 KGRLTNFQIG ICILIVIIGI VSGCCGTYSA IARLIGEMT
|
| Detection Method: | |
| Confidence: | 1.87 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
