Protein: | Y1390_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 272 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1390_ARATH.
Description | E-value | Query Range |
Subject Range |
|
384.0 | [0..9] | [272..4] |
Region A: Residues: [1-151] |
1 11 21 31 41 51 | | | | | | 1 MSFEEEEEEE TFEHTLLVVR EVSVYKIPPR TTSGGYKCGE WLQSDKIWSG RLRVVSCKDR 60 61 CEIRLEDSNS GDLFAACFVD PGRRENSVEP SLDSSRYFVL RIDDGRGKYA FIGLGFAERN 120 121 EAFDFNVALS DHEKYVRREK EKETGETSES D |
Detection Method: | |
Confidence: | 68.522879 |
Match: | 1tqzA |
Description: | Solution structure of NECAP1 protein |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.597587183571285 | bayes_pls_golite062009 |
protein binding | 0.29116370406325 | bayes_pls_golite062009 |
Region A: Residues: [152-272] |
1 11 21 31 41 51 | | | | | | 1 NHIDIHPAVN HRLKEGETIR INVKPKPTTN GTGMLSAALS GTGKPKPLAL APPPKAAGVT 60 61 RSPLPPPPND PVASRIASDG CKESRRNEPL SDLSQLKKNL PSTAGSGSSK STGAASGWAA 120 121 F |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.