| Protein: | gi|208967510 |
| Organism: | synthetic construct |
| Length: | 1047 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208967510.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1047] | [99..1145] |
|
|
0.0 | [1..1047] | [1..1047] |
|
|
0.0 | [1..1047] | [1..1047] |
|
|
0.0 | [1..1047] | [1..1047] |
|
|
0.0 | [1..1047] | [1..1034] |
|
|
0.0 | [2..1038] | [3..1036] |
|
Region A: Residues: [1-433] |
1 11 21 31 41 51
| | | | | |
1 MAVTLDKDAY YRRVKRLYSN WRKGEDEYAN VDAIVVSVGV DEEIVYAKST ALQTWLFGYE 60
61 LTDTIMVFCD DKIIFMASKK KVEFLKQIAN TKGNENANGA PAITLLIREK NESNKSSFDK 120
121 MIEAIKESKN GKKIGVFSKD KFPGEFMKSW NDCLNKEGFD KIDISAVVAY TIAVKEDGEL 180
181 NLMKKAASIT SEVFNKFFKE RVMEIVDADE KVRHSKLAES VEKAIEEKKY LAGADPSTVE 240
241 MCYPPIIQSG GNYNLKFSVV SDKNHMHFGA ITCAMGIRFK SYCSNLVRTL MVDPSQEVQE 300
301 NYNFLLQLQE ELLKELRHGV KICDVYNAVM DVVKKQKPEL LNKITKNLGF GMGIEFREGS 360
361 LVINSKNQYK LKKGMVFSIN LGFSDLTNKE GKKPEEKTYA LFIGDTVLVD EDGPATVLTS 420
421 VKKKVKNVGI FLK
|
| Detection Method: |  |
| Confidence: | 88.39794 |
| Match: | 1a16A |
| Description: | AMINOPEPTIDASE P FROM E. COLI WITH THE INHIBITOR PRO-LEU |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.3228898238998 | bayes_pls_golite062009 |
| DNA binding | 1.6830709273154 | bayes_pls_golite062009 |
| nucleic acid binding | 1.67660713848062 | bayes_pls_golite062009 |
| binding | 1.4562583231987 | bayes_pls_golite062009 |
| transcription factor activity | 1.02226978078776 | bayes_pls_golite062009 |
| protein binding | 0.170797254754318 | bayes_pls_golite062009 |
| catalytic activity | 0.148551873544128 | bayes_pls_golite062009 |
|
Region A: Residues: [434-532] |
1 11 21 31 41 51
| | | | | |
1 NEDEEEEEEE KDEAEDLLGR GSRAALLTER TRNEMTAEEK RRAHQKELAA QLNEEAKRRL 60
61 TEQKGEQQIQ KARKSNVSYK NPSLMPKEPH IREMKIYID
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [533-647] |
1 11 21 31 41 51
| | | | | |
1 KKYETVIMPV FGIATPFHIA TIKNISMSVE GDYTYLRINF YCPGSALGRN EGNIFPNPEA 60
61 TFVKEITYRA SNIKAPGEQT VPALNLQNAF RIIKEVQKRY KTREAEEKEK EGIVK
|
| Detection Method: | |
| Confidence: | 22.958607 |
| Match: | PF08644.2 |
| Description: | No description for PF08644.2 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [648-890] |
1 11 21 31 41 51
| | | | | |
1 QDSLVINLNR SNPKLKDLYI RPNIAQKRMQ GSLEAHVNGF RFTSVRGDKV DILYNNIKHA 60
61 LFQPCDGEMI IVLHFHLKNA IMFGKKRHTD VQFYTEVGEI TTDLGKHQHM HDRDDLYAEQ 120
121 MEREMRHKLK TAFKNFIEKV EALTKEELEF EVPFRDLGFN GAPYRSTCLL QPTSSALVNA 180
181 TEWPPFVVTL DEVELIHFER VQFHLKNFDM VIVYKDYSKK VTMINAIPVA SLDPIKEWLN 240
241 SCD
|
| Detection Method: | |
| Confidence: | 1.02 |
| Match: | 2gcjA |
| Description: | No description for 2gcjA was found. |
|
Region A: Residues: [891-1047] |
1 11 21 31 41 51
| | | | | |
1 LKYTEGVQSL NWTKIMKTIV DDPEGFFEQG GWSFLEPEGE GSDAEEGDSE SEIEDETFNP 60
61 SEDDYEEEEE DSDEDYSSEA EESDYSKESL GSEEESGKDW DELEEEARKA DRESRYEEEE 120
121 EQSRSMSRKR KASVHSSGRG SNRGSRHSSA PPKKKRK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
