Protein: | gi|190407831 |
Organism: | Saccharomyces cerevisiae RM11-1a |
Length: | 258 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190407831.
Description | E-value | Query Range |
Subject Range |
|
2.0E-24 | [38..199] | [163..319] |
|
2.0E-23 | [1..258] | [1..258] |
|
9.0E-23 | [38..164] | [433..556] |
Region A: Residues: [1-142] |
1 11 21 31 41 51 | | | | | | 1 MAPKKSTTKT TSKGKKPATS KGKEKSTSKA AIKKTTAKKE EASSKSYREL IIEGLTALKE 60 61 RKGSSRPALK KFIKENYPIV GSASNFDLYF NNAIKKGVEA GDFEQPKGPA GAVKLAKKKS 120 121 PEVKKEKEVS PKPKQAATSV SA |
Detection Method: | |
Confidence: | 14.0 |
Match: | 1hstA_ |
Description: | Histone H5, globular domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.835523092977445 | bayes_pls_golite062009 |
transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
Region A: Residues: [143-258] |
1 11 21 31 41 51 | | | | | | 1 TASKAKAAST KLAPKKVVKK KSPTVTAKKA SSPSSLTYKE MILKSMPQLN DGKGSSRIVL 60 61 KKYVKDTFSS KLKTSSNFDY LFNSAIKKCV ENGELVQPKG PSGIIKLNKK KVKLST |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Term | Confidence | Notes |
binding | 0.835523092977445 | bayes_pls_golite062009 |
transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
DNA binding | 0.3118855114645 | bayes_pls_golite062009 |