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View Structure Prediction Details

Protein: gi|221322363
Organism: Bacillus subtilis subsp. subtilis str. SMY
Length: 145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221322363.

Description E-value Query
Range
Subject
Range
gi|221088498, gi... - gi|221088498|ref|ZP_03558028.1| histidine triad (HIT) protein [Geobacillus sp. Y412MC61], gi|2207076...
gi|56379034, gi|... - gi|56419192|ref|YP_146510.1| Hit-like protein (cell-cycle regulation histidine triad) [Geobacillus k...
gi|229330001, gi... - gi|229499034|ref|ZP_04392724.1| histidine triad (HIT) protein [Geobacillus sp. Y412MC52], gi|2293300...
173.0 [0..1] [143..1]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHCAENCIFC KIIAGDIPSA KVYEDEHVLA FLDISQVTKG HTLVIPKTHI ENVYEFTDEL  60
   61 AKQYFHAVPK IARAIRDEFE PIGLNTLNNN GEKAGQSVFH YHMHIIPRYG KGDGFGAVWK 120
  121 THADDYKPED LQNISSSIAK RLASS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.221849
Match: 1y23A
Description: Crystal structure of a member of HIT family of proteins from bacillus subtilis
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.967106554167137 bayes_pls_golite062009
nucleic acid binding 0.724655038971066 bayes_pls_golite062009
catalytic activity 0.096119422680995 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle