| Protein: | gi|157928988, gi... |
| Organism: | synthetic construct |
| Length: | 461 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|157928988, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-83 | [2..461] | [269..728] |
|
|
1.0E-82 | [1..461] | [1..461] |
|
|
1.0E-78 | [1..461] | [1..461] |
|
|
4.0E-77 | [1..461] | [1..465] |
|
|
1.0E-71 | [1..461] | [1..465] |
|
|
4.0E-71 | [1..461] | [1..475] |
|
|
9.0E-69 | [1..461] | [1..462] |
|
Region A: Residues: [1-461] |
1 11 21 31 41 51
| | | | | |
1 MAPQSLPSSR MAPLGMLLGL LMAACFTFCL SHQNLKEFAL TNPEKSSTKE TERKETKAEE 60
61 ELDAEVLEVF HPTHEWQALQ PGQAVPAGSH VRLNLQTGER EAKLQYEDKF RNNLKGKRLD 120
121 INTNTYTSQD LKSALAKFKE GAEMESSKED KARQAEVKRL FRPIEELKKD FDELNVVIET 180
181 DMQIMVRLIN KFNSSSSSLE EKIAALFDLE YYVHQMDNAQ DLLSFGGLQV VINGLNSTEP 240
241 LVKEYAAFVL GAAFSSNPKV QVEAIEGGAL QKLLVILATE QPLTAKKKVL FALCSLLRHF 300
301 PYAQRQFLKL GGLQVLRTLV QEKGTEVLAV RVVTLLYDLV TEKMFAEEEA ELTQEMSPEK 360
361 LQQYRQVHLL PGLWEQGWCE ITAHLLALPE HDAREKVLQT LGVLLTTCRD RYRQDPQLGR 420
421 TLASLQAEYQ VLASLELQDG EDEGYFQELL GSVNSLLKEL R
|
| Detection Method: |  |
| Confidence: | 62.0 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.04462323043166 | bayes_pls_golite062009 |
| protein binding | 1.04044934052933 | bayes_pls_golite062009 |
| nucleic acid binding | 0.549076739943715 | bayes_pls_golite062009 |
