| Protein: | gi|15375305, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 436 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15375305, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
289.0 | [0..1] | [412..1] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MEDTKKKKKK NINNNQDSKK KERHIVTWSQ EEDVILREQI TLHGTENWAI IASKFKDKST 60
61 RQCRRRWYTY LNSDFKRGGW SPEEDMLLCE AQRVFGNRWT EIAKVVSGRT DNAVKNRFTT 120
121 LCKKRAKHEA MTKDSNSNTK RMLFLDGIST PRKSENETPI AKKLKRSHIL DLTEISNYGR 180
181 AEACVNQQ
|
| Detection Method: |  |
| Confidence: | 42.30103 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [189-363] |
1 11 21 31 41 51
| | | | | |
1 IRSPFSVLAR NATGIDSLEE QNQTSNVNES DGEGMFLKKD DPKVTALMQQ AELLSSLAQK 60
61 VNADNTEQSM ENAWKVLQDF LNKGKENDLF RYGIPDIDFK IEEFKDLIED LRSGYEDNQL 120
121 SWRQPDLHDS PASSEYSSGS TIMVDQSGDK TQPFSADTQT EHKQVGEELL VPKNP
|
| Detection Method: | |
| Confidence: | 1.26 |
| Match: | 1ignA |
| Description: | DNA-binding domain of rap1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [364-436] |
1 11 21 31 41 51
| | | | | |
1 DENMPISGEE KFSSPIQVTP LFRSLADGIP SPQFSESERS FLLKTLGIES SSPCPSANPS 60
61 KPPPCKRVLL HSL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.592 | N/A | N/A | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.280 | N/A | N/A | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.276 | N/A | N/A | d.95.2 | Homing endonucleases |
| View | Download | 0.269 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.267 | N/A | N/A | a.60.6 | DNA polymerase beta, N-terminal domain-like |
