| Protein: | RGP3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 362 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RGP3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
608.0 | [0..5] | [359..9] |
|
|
608.0 | [0..6] | [360..2] |
|
|
607.0 | [0..6] | [356..4] |
|
|
606.0 | [0..5] | [359..9] |
|
|
604.0 | [0..1] | [362..1] |
|
|
604.0 | [0..6] | [359..10] |
|
|
601.0 | [0..11] | [356..5] |
|
|
598.0 | [0..8] | [359..12] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MAQLYSSVKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSKVINIPVG 60
61 FDYELYNRND INRILGPKAS CISFKDSACR CFGYMVSKKK YIYTIDDDCF VAKDPTGKEI 120
121 NALEQHIKNL LSPSTP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.662 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.570 | N/A | N/A | d.312.1 | Description not found. |
| View | Download | 0.478 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.422 | N/A | N/A | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.422 | N/A | N/A | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.383 | N/A | N/A | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.363 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.335 | N/A | N/A | b.61.2 | Metalloprotease inhibitor |
|
Region A: Residues: [137-188] |
1 11 21 31 41 51
| | | | | |
1 HFFNTLYDPY RDGADFVRGY PFSMREGAIT AVSHGLWLNI PDYDAPTQLV KP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.501 | a.64.1 | Saposin |
| View | Download | 0.487 | g.58.1 | Pheromone ER-23 |
| View | Download | 0.487 | g.58.1 | Pheromone ER-23 |
| View | Download | 0.466 | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.457 | g.58.1 | Pheromone ER-23 |
| View | Download | 0.457 | g.58.1 | Pheromone ER-23 |
| View | Download | 0.450 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.427 | a.4.1 | Homeodomain-like |
| View | Download | 0.397 | a.64.2 | Bacteriocin AS-48 |
|
Region A: Residues: [189-362] |
1 11 21 31 41 51
| | | | | |
1 LEKNSRYVDA VMTIPKGTLF PMCGMNLAFD RELIGPAMYF GLMGDGQPIG RYDDMWAGWC 60
61 VKVICDHMGW GVKTGLPYIW HSKASNPFVN LKKEYNGIFW QEEAIPFFQS VTLPKECTSV 120
121 QQCYLELAKL VREKLGKVDP YFITLATGMV TWIEAWEELN SAEGTEAEAP KGKN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
