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View Structure Prediction Details

Protein: 2A5G_ARATH
Organism: Arabidopsis thaliana
Length: 522 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 2A5G_ARATH.

Description E-value Query
Range
Subject
Range
gi|109486753, gi... - gi|109486753|ref|XP_001065844.1| PREDICTED: similar to delta isoform of regulatory subunit B56, prot...
845.0 [0..6] [518..80]

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Predicted Domain #1
Region A:
Residues: [1-522]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT  60
   61 VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK LSMCCVVFDF NDPSKNLREK 120
  121 EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE 180
  181 PALEPAWPHL QVVYELLLRF VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT 240
  241 ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK 300
  301 LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF 360
  361 LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE RALFLWNNDH IRNLITQNHK 420
  421 VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA 480
  481 KREATWKLLE ELAASKSVSN EAVLVPRFSS SVTLATGKTS GS

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Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2nppB
Description: No description for 2nppB was found.

Predicted functions:

Term Confidence Notes
binding 1.2838670704442 bayes_pls_golite062009
protein binding 0.624843978607333 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle