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View Structure Prediction Details

Protein: ACCO5_ARATH
Organism: Arabidopsis thaliana
Length: 307 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACCO5_ARATH.

Description E-value Query
Range
Subject
Range
ACCO_ACTCH - 1-aminocyclopropane-1-carboxylate oxidase - Actinidia chinensis (Kiwi) (Yangtao)
ACCO_ACTDE - 1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1
330.0 [0..2] [307..3]

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Predicted Domain #1
Region A:
Residues: [1-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER  60
   61 EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN QNEWPSNIKE TMGEYREEVR 120
  121 KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH 180
  181 TDAGGVVLLF QDDEYDGLQV LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL 240
  241 AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR 300
  301 FLAVKSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.0
Match: 1w9yA
Description: The structure of ACC oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.588242505102319 bayes_pls_golite062009
nucleic acid binding 0.0678642854814351 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle