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View Structure Prediction Details

Protein: SCP32_ARATH
Organism: Arabidopsis thaliana
Length: 463 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP32_ARATH.

Description E-value Query
Range
Subject
Range
gi|2443888, gi|2... - pir||B96637 hypothetical protein F11P17.14 [imported] - Arabidopsis thaliana, gi|2443888|gb|AAB71481...
459.0 [0..1] [463..1]

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Predicted Domain #1
Region A:
Residues: [1-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNISNVSIA LYLCTLFAFV SSDSPEAMRD LVTNFPGQPK VSFRHYAGYV TVNIISGRAL  60
   61 FYWFFEAMTH PNVKPLVLWL NGGPGCSSVG YGATQEIGPF LVDNKGNSLK FNPYAWNKEA 120
  121 NILFLESPAG VGFSYSNTSS DYRKLGDDFT ARDSYTFLQK WFLRFPAYKE KDFFIAGESY 180
  181 AGKYVPELAE VIYDKNKDNE NLSLHINLKG ILLGNPLTSY AEDWTGWVDY AWNHAVVSDE 240
  241 TYRVIKQSCN FSSDTTWDVK DCKEGVDEIL KQYKEIDQFS LYTPICMHHS SKVDSYANYK 300
  301 TTIPRLFDGF DPCLDDYAKV FYNRADVQKA LHATDGVHLK NWTICNDDIL NHWNWTDSKR 360
  361 SVLPIYKKLI AGGFRVWVYS GDTDGRVPVL STRYCINKLE LPIKTAWRPW YHETQVSGWF 420
  421 QEYEGLTFAT FRGAGHDVPS FKPSESLAFF SAFLNGVPPP LSR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 99.0
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.3250951453762 bayes_pls_golite062009
binding 0.780364496307855 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
endopeptidase activity 0.35106325845064 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.1174692258176 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle