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View Structure Prediction Details

Protein: GDL11_ARATH
Organism: Arabidopsis thaliana
Length: 385 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL11_ARATH.

Description E-value Query
Range
Subject
Range
GDL6_ARATH - GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana GN=At1g28570 PE=2 SV=1
372.0 [0..1] [380..1]

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Predicted Domain #1
Region A:
Residues: [1-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTLLMASL IVSFLLILYY TTIVVASSES RCRRYKSIIS FGDSIADTGN YVHLSNVNNL  60
   61 PQAAFLPYGE SFFHPPSGRY SDGRLVIDFI AEFLGLPYVP PYFGSQNVSF NQGINFAVYG 120
  121 ATALDRAFLV KQGIKSDFTN ISLSVQLNTF KQILPNLCAS STRDCREMLG DSLILMGEIG 180
  181 GNDYNYPFFE GKSINEIKEL VPLIIKAISS AIVDLIDLGG KTFLVPGNFP IGCSTAYLTL 240
  241 FQTATVEHDP FTGCIPWLNK FGEHHNEQLK IELKQLQKLY PHVNIIYADY YNSLYGLFQE 300
  301 PAKYGFKNRP LAACCGVGGQ YNFTIGKECG ENGVSYCQNP SEYVNWDGYH LTEATYQKMA 360
  361 QGLLNGRYTT PAFDWSCLGS YDFSG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.12
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle