| Protein: | gi|30680512 |
| Organism: | Arabidopsis thaliana |
| Length: | 334 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30680512.
| Description | E-value | Query Range |
Subject Range |
|
|
225.0 | [0..2] | [332..10] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MESTESYAAG SPEELAKRSP EPHDSSEADS AEKPTHIRFL VSNAAAGSVI GKGGSTITEF 60
61 QAKSGARIQL SRNQEFFPGT TDRIIMISGS IKEVVNGLEL ILDKLHSELH A
|
| Detection Method: |  |
| Confidence: | 25.30103 |
| Match: | 2annA |
| Description: | No description for 2annA was found. |
|
Region A: Residues: [112-334] |
1 11 21 31 41 51
| | | | | |
1 EDGNEVEPRR RIRLVVPNSS CGGIIGKGGA TIKSFIEESK AGIKISPLDN TFYGLSDRLV 60
61 TLSGTFEEQM RAIDLILAKL TEDDHYSQNV HSPYSYAGLF YSGFHGPPYA YALPSVATAG 120
121 YNSVNYAPNG SGGKYQNHKE EASTTVTIGV ADEHIGLVLG RGGRNIMEIT QMTGARIKIS 180
181 DRGDFMSGTT DRKVSITGPQ RAIQQAETMI KQKVDSATER TTD
|
| Detection Method: | |
| Confidence: | 22.0 |
| Match: | 1j4wA |
| Description: | Far upstream binding element, FBP, KH3 and KH4 domains |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 5.18414740305744 | bayes_pls_golite062009 |
| mRNA binding | 3.82977088614136 | bayes_pls_golite062009 |
| nucleic acid binding | 3.68444148122352 | bayes_pls_golite062009 |
| binding | 2.8667878224392 | bayes_pls_golite062009 |
| transcription regulator activity | 1.43703138180882 | bayes_pls_golite062009 |
| DNA binding | 1.20852534725468 | bayes_pls_golite062009 |
| 1.02980840568405 | bayes_pls_golite062009 | |
| poly-pyrimidine tract binding | 0.63404501189528 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.489176583045793 | bayes_pls_golite062009 |
| protein binding | 0.468975312217329 | bayes_pls_golite062009 |
| transcription factor activity | 0.386248501195543 | bayes_pls_golite062009 |
| catalytic activity | 0.113112541746059 | bayes_pls_golite062009 |
