| Protein: | gi|30694648 |
| Organism: | Arabidopsis thaliana |
| Length: | 242 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30694648.
| Description | E-value | Query Range |
Subject Range |
|
|
255.0 | [0..2] | [196..89] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MDEQVQEPLS DQVFINFRGD ELREIFVNHL ELQLRNAGIN VFIDTKEQKG RRLQYLFTRI 60
61 KKSKIALAIF SKRYCESKWC LDELVTMNEQ MKEKKLVVIP IFYNVRSDDV KRAANPDGEG 120
121 NLDGEFSLPF KQLKQNHAGE PERVEGFSRS NS
|
| Detection Method: |  |
| Confidence: | 15.30103 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.261666574457319 | bayes_pls_golite062009 |
|
Region A: Residues: [153-242] |
1 11 21 31 41 51
| | | | | |
1 KYKHDTDFVL DIVKEVKKQL NIPTDNSWSA IGVAFLAITI NLIFSFFIAP KYLPDQKFFQ 60
61 TPEWFIGTLA VVLASWFWYK NNQNKAPPPS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
