| Protein: | gi|42572961 |
| Organism: | Arabidopsis thaliana |
| Length: | 241 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572961.
| Description | E-value | Query Range |
Subject Range |
|
|
171.0 | [0..4] | [241..19] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MAIQARPLVF INHGESDQSD GFIRHVERAL NDEGFNVFID SDERRGRGME HIFRAIDNSN 60
61 VALVIFSDRY TASELCLHEA VRIYDRRREG KLVLIPVFYR VSEDDVNMFN GRFGESFLET 120
121 LTIQGFRDHP FAEHWMRNVN FICTDTGFTS AD
|
| Detection Method: |  |
| Confidence: | 10.221849 |
| Match: | 1fywA |
| Description: | Toll-like receptor 2, TLR2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.261666574457319 | bayes_pls_golite062009 |
|
Region A: Residues: [153-241] |
1 11 21 31 41 51
| | | | | |
1 YSSNDTSLVE EIVRAIKRRL QGKKLPRRVQ DEKLPSPLDM FMPKQPNAQE GFGKELLYVA 60
61 IAALLCYFII PFVFTDWMSS VSFSGSLLF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
