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View Structure Prediction Details

Protein: SMO12_ARATH
Organism: Arabidopsis thaliana
Length: 299 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SMO12_ARATH.

Description E-value Query
Range
Subject
Range
gi|27446631 - gi|27446631|gb|AAK61361.1| putative sterol 4-alpha-methyl-oxidase [Arabidopsis thaliana]
250.0 [0..1] [299..1]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPYATIEEA SIALSRNLTW LETLWFDYSA TKSDYYLYCH NILFLFLIFS LVPLPLVFIE  60
   61 SSQSTSDLFN RYKIQPKV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNSFSSMFKC YKDVMKMFIL VVGPLQLVSY PSIQMIEIRS GLPLPSCMEI VAQLVVYFLV  60
   61 EDYTNYWVHR FFHCKWGYEK FHHIHHEYTA PIGYAAPYAH WAEVLLLGIP TFLGPAIAPG 120
  121 HMITFWLWIA LRQIEAIETH SGYDFPWSLT KYIPFYGGAE YHDYHHYVGG QSQSNFASVF 180
  181 TYCDYIYGTD KGYRFQKKLL QQMKEKSKKS NKLVNGGEKF D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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