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View Structure Prediction Details

Protein: SMO12_ARATH
Organism: Arabidopsis thaliana
Length: 299 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SMO12_ARATH.

Description E-value Query
Range
Subject
Range
gi|27446631 - gi|27446631|gb|AAK61361.1| putative sterol 4-alpha-methyl-oxidase [Arabidopsis thaliana]
250.0 [0..1] [299..1]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPYATIEEA SIALSRNLTW LETLWFDYSA TKSDYYLYCH NILFLFLIFS LVPLPLVFIE  60
   61 SSQSTSDLFN RYKIQPKV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNSFSSMFKC YKDVMKMFIL VVGPLQLVSY PSIQMIEIRS GLPLPSCMEI VAQLVVYFLV  60
   61 EDYTNYWVHR FFHCKWGYEK FHHIHHEYTA PIGYAAPYAH WAEVLLLGIP TFLGPAIAPG 120
  121 HMITFWLWIA LRQIEAIETH SGYDFPWSLT KYIPFYGGAE YHDYHHYVGG QSQSNFASVF 180
  181 TYCDYIYGTD KGYRFQKKLL QQMKEKSKKS NKLVNGGEKF D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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