YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: P2C51_ARATH
Organism: Arabidopsis thaliana
Length: 528 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2C51_ARATH.

Description E-value Query
Range
Subject
Range
gi|16604689 - gi|16604689|gb|AAL24137.1| unknown protein [Arabidopsis thaliana]
348.0 [0..1] [528..1]

Back

Predicted Domain #1
Region A:
Residues: [1-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSIKSSLL NLGLLIIFFV FFFLVINCRG ESSTCLAVYK QGGAPAVFQS PKCPRWILQN  60
   61 WGSPTHSGAG RCHTAAIQGR RNYQEDRLLC ALDLRIPFPG KTGTPKDVLV GIAAVFDGHN 120
  121 GAEASDMASK LLLDYFALHI NFLLDATFSA MTRKLIGRFP TKGDHSVILH GVSRDEIMHL 180
  181 YNLDFQMQFR DSLPLHFDDS LPLDIMKEAL LRAIHDIDVT FTKEASNRKL NSGSTATIAL 240
  241 IADGQLMVAS IGDSKALLCS EKFETLEEAR ATLVKLYRER RRNRGSSPSR FSDFKLEHGN 300
  301 GLLRFIAKEL TKDHHPNRED EKIRVEAAGG YVTEWAGVPR VNGQLTVSRA IGDLTYRSYG 360
  361 VISAPEVMDW QPLVANDSFL VVSSDGIFEK LEVQEVCDLL WEVNNQTSSG AGVPSYCSIS 420
  421 LADCLVNTAF EKGSMDNMAA VVVPLKSNLV TQLQRKEQSM NDNKDKIASA LPCSNCTLPL 480
  481 PNDINLGPLQ LKQAQPLGTM FNRLLRLKTE VFAAFICQRT LLGHLKGK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.522879
Match: 1a6qA
Description: CRYSTAL STRUCTURE OF THE PROTEIN SERINE/THREONINE PHOSPHATASE 2C AT 2 A RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.11838322183685 bayes_pls_golite062009
phosphatase activity 6.21772130528703 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.01468340383068 bayes_pls_golite062009
protein serine/threonine phosphatase activity 5.36440205874188 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.3038124139232 bayes_pls_golite062009
hydrolase activity 3.93511198756578 bayes_pls_golite062009
catalytic activity 1.53401212718168 bayes_pls_golite062009
protein binding 1.22021202688227 bayes_pls_golite062009
binding 0.845528844927241 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle