YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Mass Spectrometry Run

Run Information:


Bait Protein: KOG1
Organism: Saccharomyces cerevisiae
Publication: Reinke A, Anderson S, McCaffery JM, Yates J 3rd, Aronova S, Chu S, Fairclough S, Iverson C, Wedaman KP, Powers T. TOR complex 1 includes a novel component, Tco89p (YPL180w), and cooperates with Ssd1p to maintain cellular integrity in Saccharomyces cerevisiae. J Biol Chem. 2004 Apr 9;279(15):14752-62. Epub 2004 Jan 21.
Comments: No comments.

Raw Data:

Download DTASelect Filter text
Download MS2 and SEQUEST Data

FILTERED Run Results: [unfilter]

[View our MS interpretation guidelines.]

  Hit Protein Protein Desc Sequence Count Spectrum Count Sequence Coverage NSAF Mol. Wt.
[View Peptides]   IBI2 Protein of unknown function that associates with ribosomes; green fluorescent protein (GFP)-fusion p... 5 19 63.5% 0.0285 22179
[View Peptides]   ENO2 Enolase II, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosp... 11 23 49.4% 0.0156 46914
[View Peptides]   DEF1 RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and prot... 35 130 36.6% 0.0521 83973
[View Peptides]   RPP2A Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction... 2 17 31.1% 0.0474 10746
[View Peptides]   RPP2B Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction ... 2 4 30.9% 0.0108 11050
[View Peptides]   SPT4 Protein involved in the regulating Pol I and Pol II transcription, pre-mRNA processing, kinetochore ... 2 27 30.4% 0.0783 11158
[View Peptides]   SUP35 Translation termination factor eRF3; altered protein conformation creates the [PSI(+)] prion, a domi... 18 30 29.8% 0.013 76551
[View Peptides]   SSE1 ATPase that is a component of the heat shock protein Hsp90 chaperone complex; binds unfolded protein... 13 38 27.0% 0.0162 77367
[View Peptides]   TCO89 Subunit of TORC1 (Tor1p or Tor2p-Kog1p-Lst8p-Tco89p), a complex that regulates growth in response to... 12 15 25.4% 0.00555 88845
[View Peptides]   PDC1 Major of three pyruvate decarboxylase isozymes, key enzyme in alcoholic fermentation, decarboxylates... 7 31 25.2% 0.0163 61495
[View Peptides]   TOR1 PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in... 43 310 24.2% 0.0371 281138
[View Peptides]   AHP1 Thiol-specific peroxiredoxin, reduces hydroperoxides to protect against oxidative damage; function i... 2 3 23.3% 0.00504 19115
[View Peptides]   CMD1 Calmodulin; Ca++ binding protein that regulates Ca++ independent processes (mitosis, bud growth, act... 2 5 19.7% 0.0101 16135
[View Peptides]   LST8 Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface; ... 5 6 19.5% 0.00586 34034
[View Peptides]   KOG1 Subunit of TORC1, a rapamycin-sensitive complex involved in growth control that contains Tor1p or To... 18 56 19.5% 0.0106 177608
[View Peptides]   SPT5 Protein involved in regulating Pol I and Pol II transcription and pre-mRNA processing; forms a compl... 15 126 18.3% 0.0351 115650
[View Peptides]   FBA1 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis; catalyzes conversio... 4 53 16.7% 0.0437 39621
[View Peptides]   MLC1 Essential light chain for Myo1p, light chain for Myo2p; stabilizes Myo2p by binding to the neck regi... 2 15 14.8% 0.0298 16444
[View Peptides]   FKS1 Catalytic subunit of 1,3-beta-D-glucan synthase, functionally redundant with alternate catalytic sub... 16 53 13.9% 0.00835 214849
[View Peptides]   TPI1 Triose phosphate isomerase, abundant glycolytic enzyme; mRNA half-life is regulated by iron availabi... 2 3 13.3% 0.00358 26795
[View Peptides]   YDR210C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 5 7 12.7% 0.0047 49187
[View Peptides]   YDR098C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 5 7 12.7% 0.0047 49057
[View Peptides]   YDR261C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; in YDRCTY1-3 TYB is mutant and probably no... 5 7 12.7% 0.0047 49009
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 5 7 12.7% 0.0047 49129
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 5 7 12.7% 0.0047 48953
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 5 7 12.7% 0.0047 48953
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 5 7 12.7% 0.0047 49129
[View Peptides]   YGR027W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 5 7 12.7% 0.0047 49056
[View Peptides]   YGR038C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 5 7 12.7% 0.0047 49034
[View Peptides]   YPR137C-A, YAR010C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 5 7 12.7% 0.0047 49072
[View Peptides]   TEF1, TEF2 Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ... 3 3 12.2% 0.00194 50033
[View Peptides]   TEF1, TEF2 Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ... 3 3 12.2% 0.00194 50033
[View Peptides]   PET10 Protein of unknown function that co-purifies with lipid particles; expression pattern suggests a rol... 2 3 10.2% 0.00313 31246
[View Peptides]   SSC1 Hsp70 family ATPase, constituent of the import motor component of the Translocase of the Inner Mitoc... 3 28 9.8% 0.0127 70628
[View Peptides]   PIM1 ATP-dependent Lon protease, involved in degradation of misfolded proteins in mitochondria; required ... 5 12 9.2% 0.00313 127112
[View Peptides]   GSC2 Catalytic subunit of 1,3-beta-glucan synthase, involved in formation of the inner layer of the spore... 9 17 7.8% 0.00265 216988
[View Peptides]   YDJ1 Protein chaperone involved in regulation of the HSP90 and HSP70 functions; involved in protein trans... 2 2 7.3% 0.00145 44671
[View Peptides]   HSF1 Trimeric heat shock transcription factor, activates multiple genes in response to stresses that incl... 2 2 7.1% 7.1E-4 93282
[View Peptides]   DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, required for translation initiation of all ye... 2 2 7.1% 9.79E-4 65553
[View Peptides]   EFT2, EFT1 Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein s... 3 9 6.7% 0.00316 93289
[View Peptides]   EFT2, EFT1 Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein s... 3 9 6.7% 0.00316 93289
[View Peptides]   SSE2 Member of the heat shock protein 70 (HSP70) family; may be involved in protein folding; localized to... 3 5 6.3% 0.00213 77621
[View Peptides]   PMA1 Plasma membrane H+-ATPase, pumps protons out of the cell; major regulator of cytoplasmic pH and plas... 2 3 5.7% 9.66E-4 99619
[View Peptides]   PMA2 Plasma membrane H+-ATPase, isoform of Pma1p, involved in pumping protons out of the cell; regulator ... 2 3 5.5% 9.37E-4 102172
[View Peptides]   CDC19 Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvat... 2 2 5.0% 0.00118 54545
[View Peptides]   VPS13 Protein of unknown function; heterooligomeric or homooligomeric complex; peripherally associated wit... 6 10 4.1% 9.41E-4 357850
[View Peptides]   YDR261C-D Retrotransposon TYA Gag and TYB Pol genes; in YDRCTY1-3 TYB is mutant and probably non-functional 5 7 3.8% 0.00129 174779
[View Peptides]   MET6 Cobalamin-independent methionine synthase, involved in methionine biosynthesis and regeneration; req... 2 2 3.7% 7.71E-4 85860
[View Peptides]   CRT10 Protein involved in transcriptional regulation of RNR2 and RNR3; expression of the gene is induced b... 2 3 3.6% 9.27E-4 109715
[View Peptides]   YGR038C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 5 7 3.5% 0.00118 190737
[View Peptides]   TOR2 PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that regulates growth i... 5 14 3.5% 0.00167 281509
[View Peptides]   YDR098C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 5 7 3.5% 0.00118 191131
[View Peptides]   YDR210C-D Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 5 7 3.5% 0.00118 190675
[View Peptides]   YDR365W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 5 7 3.5% 0.00118 190643
[View Peptides]   YER138C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 5 7 3.5% 0.00118 190671
[View Peptides]   YDR316W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 5 7 3.4% 0.00118 191603
[View Peptides]   YER160C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 5 7 3.4% 0.00118 192176
[View Peptides]   YGR027W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 5 7 3.4% 0.00118 192088
[View Peptides]   CHC1 Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport ... 2 2 2.8% 3.58E-4 187233

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle