| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.036] [SVM Score: 0.669272596159] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| myosin V complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| filamentous actin | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| unconventional myosin complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| myosin complex | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
| cytoplasmic dynein complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| dynein complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| actin filament | 2.859E-3 | 2 | 9 | 1 | 6292 |
| cytoplasmic microtubule | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| microtubule associated complex | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| microtubule | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| motor activity | 7.7306E-6 | 2 | 18 | 2 | 6292 |
| calmodulin binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| microfilament motor activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| nucleoside-triphosphatase activity | 2.7262E-3 | 2 | 329 | 2 | 6292 |
| hydrolase activity, acting on acid anhydrides | 3.1391E-3 | 2 | 353 | 2 | 6292 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 3.1391E-3 | 2 | 353 | 2 | 6292 |
| pyrophosphatase activity | 3.1391E-3 | 2 | 353 | 2 | 6292 |
| actin filament binding | 3.811E-3 | 2 | 12 | 1 | 6292 |
| actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |