| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.679749244953] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| COQ6 |
|
|
|
| GUT2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mitochondrial membrane | 1.7808E-3 | 2 | 266 | 2 | 6292 |
| mitochondrial envelope | 2.4514E-3 | 2 | 312 | 2 | 6292 |
| integral to mitochondrial outer membrane | 4.1283E-3 | 2 | 13 | 1 | 6292 |
| intrinsic to mitochondrial outer membrane | 4.1283E-3 | 2 | 13 | 1 | 6292 |
| integral to mitochondrial membrane | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
| envelope | 6.43E-3 | 2 | 505 | 2 | 6292 |
| organelle envelope | 6.43E-3 | 2 | 505 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| oxidoreduction coenzyme metabolic process | 8.6451E-5 | 2 | 59 | 2 | 6292 |
| coenzyme metabolic process | 3.6076E-4 | 2 | 120 | 2 | 6292 |
| cofactor metabolic process | 5.9526E-4 | 2 | 154 | 2 | 6292 |
| quinone cofactor metabolic process | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| ubiquinone metabolic process | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| ubiquinone biosynthetic process | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| quinone cofactor biosynthetic process | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| NADH oxidation | 3.811E-3 | 2 | 12 | 1 | 6292 |
| NADH metabolic process | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| NAD metabolic process | 7.9314E-3 | 2 | 25 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ubiquinone biosynthetic process monooxygenase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| glycerol-3-phosphate dehydrogenase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |