From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.682419606386] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
KEX2 |
|
|
|
STE13 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
trans-Golgi network | 3.9411E-6 | 2 | 13 | 2 | 6292 |
Golgi apparatus part | 3.5475E-4 | 2 | 119 | 2 | 6292 |
Golgi apparatus | 7.3441E-4 | 2 | 171 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
peptide pheromone maturation | 1.819E-6 | 2 | 9 | 2 | 6292 |
protein maturation | 3.9411E-5 | 2 | 40 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
peptidase activity, acting on L-amino acid peptides | 2.256E-4 | 2 | 95 | 2 | 6292 |
peptidase activity | 9.2646E-4 | 2 | 192 | 2 | 6292 |
serine-type endopeptidase activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
aminopeptidase activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
exopeptidase activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
serine-type peptidase activity | 1.9064E-3 | 2 | 6 | 1 | 6292 |
serine hydrolase activity | 4.1283E-3 | 2 | 13 | 1 | 6292 |