| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.697106063719] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| incipient cellular bud site | 5.0022E-5 | 2 | 45 | 2 | 6292 |
| cellular bud neck | 4.1715E-4 | 2 | 129 | 2 | 6292 |
| cellular bud | 6.9196E-4 | 2 | 166 | 2 | 6292 |
| site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
| cellular bud neck septin structure | 2.859E-3 | 2 | 9 | 1 | 6292 |
| cellular bud neck septin ring | 2.859E-3 | 2 | 9 | 1 | 6292 |
| cleavage apparatus septin structure | 2.859E-3 | 2 | 9 | 1 | 6292 |
| septin ring | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| septin cytoskeleton | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| cell division site | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| cell division site part | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| enzyme regulator activity | 1.0773E-3 | 2 | 207 | 2 | 6292 |
| Rho guanyl-nucleotide exchange factor activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| Ras guanyl-nucleotide exchange factor activity | 5.7138E-3 | 2 | 18 | 1 | 6292 |