| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.787713916401] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| DCI1 |
|
|
|
| MDH3 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microbody lumen | 4.5979E-6 | 2 | 14 | 2 | 6292 |
| peroxisomal matrix | 4.5979E-6 | 2 | 14 | 2 | 6292 |
| peroxisomal part | 3.0063E-5 | 2 | 35 | 2 | 6292 |
| microbody part | 3.0063E-5 | 2 | 35 | 2 | 6292 |
| microbody | 8.3521E-5 | 2 | 58 | 2 | 6292 |
| peroxisome | 8.3521E-5 | 2 | 58 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| dodecenoyl-CoA delta-isomerase activity | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| L-malate dehydrogenase activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| intramolecular oxidoreductase activity, transposing C=C bonds | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| malate dehydrogenase activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| intramolecular oxidoreductase activity | 6.0308E-3 | 2 | 19 | 1 | 6292 |